Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac13g0388 | ATGGGGAAAACCGGAGCGAAATTGCCGAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGTGTGCCTATCCAGTCCAAACCGGACTCTGTTTCTGTGAAAACCGGCCAGATGAAGGCTGATGATTTCGAAGCGAAGAAATGTGATGACAATAAAACGTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCAGCTTTGAAGCTGAAGGAGCTCTGCAATGGGCGCTCTCACACACTGTTCAGAATCAAGACAAGATTCTTCTTCTCCATGTCACCAAACCTTCAAAAAGAGGGGAAGGACCCAGCAAGGAGACGGCTCCAAGAGCATTTGAAGTGGTTCAGTCCATGAGAAATTTATGTCAACTGAAGAGACCCGAGGTGGAAATCGAGGTTGCAGTGGTGGAAGGGAAAGAGAAAGGGCCAGTGATAGTGGAAGAAGCGAGGAAGCAAGGAGCGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCCACGACGTGGCGGCTTCTGATGGTGTGGGCCGGCCACCGGTTGGGCGGCGGCGGCGGCGGTGGCGCGGTGGAGTATTGTATTCAGAATGCGAGCTGCATGGCGATTGCAGTGAGGAGGAAGAGCAAGAAATTGGGTGGCTATTTGATTACAACGAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA | 681 | 51.25 | MGKTGAKLPSFCLNRIRPHVRVPIQSKPDSVSVKTGQMKADDFEAKKCDDNKTLGIGRKIMIVVDSSFEAEGALQWALSHTVQNQDKILLLHVTKPSKRGEGPSKETAPRAFEVVQSMRNLCQLKRPEVEIEVAVVEGKEKGPVIVEEARKQGASLLVLGQKKRSTTWRLLMVWAGHRLGGGGGGGAVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 226 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 2767276 | 2768127 | + | Lag0040184.1 | Lac13g0388 | 591544 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac13g0388 | 226 | Pfam | Universal stress protein family | 58 | 203 | IPR006016 | - | |
| Lac13g0388 | 226 | CDD | USP_Like | 59 | 202 | - | - | |
| Lac13g0388 | 226 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 226 | - | - | |
| Lac13g0388 | 226 | Gene3D | HUPs | 57 | 210 | IPR014729 | - | |
| Lac13g0388 | 226 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 58 | 205 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac10g0185 | Lac-Chr10:1432061 | Lac13g0388 | Lac-Chr13:2767276 | 1.60E-46 | dispersed | |
| Lac13g0388 | Lac-Chr13:2767276 | Lac8g1850 | Lac-Chr8:36804647 | 5.80E-25 | dispersed | |
| Lac13g0388 | Lac-Chr13:2767276 | Lac3g0542 | Lac-Chr3:4147156 | 1.20E-49 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac13g0388 | - | - | - | 0.0 |