Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0443 ATGCCGTCGCCTCAGATCCTTCCTATAACCCAGCCCCCTTCGTCGTCTCCATTTTCCTCCGAAGGCTCAGCGGCCAATTCTATTATGGCAACAGCATCTACTACCATAGACGTAACGTTGCTTAAAGAAGACGATGAACAGAGAACTGGAGTGCTTGTTTCTCCCTTGTTCGAGGATGATAAGACGGTAGCTTATAAGCCCTTTCTTCCAAGGACTTCAAGCTATGCCTCCACCACATCCAGTTCATCCACCGGAACCATTATGTACAAGCAGAAGCGGAGGCGAGTCAAGAGTGAAGAATTTTTGCCCTTTCTCTCCGGTGACGGCCGTCACCAGACTGTTGATCGTCATGTCGAGAATGCCGATGTCGTGAGAGCTGAGAGATTTCTACTGACTCGGTTTGGTTTGAAACTCTCGAAATATATTAGGGTAGCCATCAGATATATTGCAAGATTTCTCGCACTTGGCTGTTACTCATTGTTTCTTCTCCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGCCAGATACGCAGAAGTATACCCTATGGTGATAAACCAAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATCACTGGCGGGGCTTGGATTATTGGGTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAACGAGATGTCATCGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACCATGAGTGATATGATTGACGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAACATCAGAGAATTTGGAGGCGATCCAAACAGAATTTTTCTAATGGGTCAGTCAGCTGGCGCTCATATAGCTGCTTGCACACTTTTGGAGCAAGCAATTAAAGAGGTTCGCAGAGTAGAAAGTATCTCATGGAGTGTGTCCCAAATTAAAGCTTACTTTGGTTTGTCAGGAGGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAAGTAATGATCCTGGAAGAACCTAACATGGGAGCTGTCGTCTCGATTCTTCCTCCCATCATTTTATTTCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGACTCTTCAAAGTGTTGGAGTGAAAGCCGAGACATTTTTCTACGAAGGAAAGACACATACAGATGTATTTGTTCAGTCACATGAAGTAACGTTTGCTGGCTTCATCAGTTCCCTTTTTGCAATAACCTTAATCTTTCTTCATGCAGGATCCACTAAGGGTGGCAGAGATCAGATGTTTGAAGATCTTGTCGCGATCATCCATGCTAATGATGCAGATGCGCAGGCGAGAGATGCAGAGGCACCTCCAAGAAGACGCCTTGTACCCGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCTTTCTAA 1443 43.87 MPSPQILPITQPPSSSPFSSEGSAANSIMATASTTIDVTLLKEDDEQRTGVLVSPLFEDDKTVAYKPFLPRTSSYASTTSSSSTGTIMYKQKRRRVKSEEFLPFLSGDGRHQTVDRHVENADVVRAERFLLTRFGLKLSKYIRVAIRYIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIFLMGQSAGAHIAACTLLEQAIKEVRRVESISWSVSQIKAYFGLSGGIMEGEQSLKRFSPEVMILEEPNMGAVVSILPPIILFHGTADYSIPSDASKTFAETLQSVGVKAETFFYEGKTHTDVFVQSHEVTFAGFISSLFAITLIFLHAGSTKGGRDQMFEDLVAIIHANDADAQARDAEAPPRRRLVPEFMLMLARSVSPF 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3163935 3167220 + Lag0040239.1 Lac13g0443 591599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0443 480 SUPERFAMILY alpha/beta-Hydrolases 175 400 IPR029058 -
Lac13g0443 480 Gene3D alpha/beta hydrolase 173 409 IPR029058 -
Lac13g0443 480 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 91 446 IPR050300 GO:0016298(PANTHER)
Lac13g0443 480 Pfam BD-FAE 193 381 IPR049492 -
Lac13g0443 480 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Lac13g0443 480 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0190 Lac-Chr11:1792216 Lac13g0443 Lac-Chr13:3163935 2.40E-112 transposed
Lac13g0443 Lac-Chr13:3163935 Lac8g1175 Lac-Chr8:25026730 1.20E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0443 K15889 - csv:101206426 773.081