Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac13g0449 | ATGGCCGTAGCATTGTCCTCACTGGCCCCGTTACTCATCTTTGCCAGGATTTTTGGTCTGCTTGTTGTCGTTCTGGTCTTTGTTTGGGCTCTTGCTTTCAGTTCTAGCTTCGGCCATCTCCCCCCTCCCGGGATGACCGTATCTTCGACGTACTGCACTTTCCCTTTTGCATTTTGTACTTCTTGTGGACCTATTTGTATTTCGATGGGAGATCGATTTTCTGAGGGTAAAAGAATTTTGGGTTTTGTTTTGCAGGTTCTGCATCCTTTGTTCATGGTAATTGGTCTCGTTCTACTCAGCGGAGAAGCAATTTTGGTCCATAGTTGGTTGCCTGGTTCGAGGAATTTGAGGAAATCTGTTCATTTGATTCTTCAAGGGCTGGCTTTGACTTCTGGCATTTTTGGAATTTGGACTAAGTTTCATTGGGATCGTGGCTTTTTGGCTAATTTCCACAGTATACATTCTTGGATGGGTTTGATCGTTGTCACTTTGTTCGGAGCTCAGTGGATGATGGGTTTTCTGAGCTTCTGGCATTGGAGGGAGGTTAGAGCCACAAGAGAAAGAGTGCTGCCATGGCATGTGTTCCTTGGTTTATACAGCTATGCATTGGCAGTGGCAACAGCAGAAACAGGGCTTCTTGAGAAGTTGACATTGTTGCAAACAAAGAGAAATGTTCCTAGGAAGGGCCCTGAAGCCATGGTTGTGAACAGTCTTGGTTTGGCCATGGCTTTGCTTAGTGGAATTGTGGTGCTTACTGCTATATCTCCCAAATATTCTCCTTCCCTTCCTACCATTAAACAGCCATTTCCCTCTAATTCAAAGCCCTTGTCTTCTTGA | 837 | 45.04 | MAVALSSLAPLLIFARIFGLLVVVLVFVWALAFSSSFGHLPPPGMTVSSTYCTFPFAFCTSCGPICISMGDRFSEGKRILGFVLQVLHPLFMVIGLVLLSGEAILVHSWLPGSRNLRKSVHLILQGLALTSGIFGIWTKFHWDRGFLANFHSIHSWMGLIVVTLFGAQWMMGFLSFWHWREVRATRERVLPWHVFLGLYSYALAVATAETGLLEKLTLLQTKRNVPRKGPEAMVVNSLGLAMALLSGIVVLTAISPKYSPSLPTIKQPFPSNSKPLSS | 278 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 3231072 | 3232653 | + | Lag0040245.1 | Lac13g0449 | 591605 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac13g0449 | 278 | Gene3D | - | 1 | 261 | - | - | |
| Lac13g0449 | 278 | ProSiteProfiles | Cytochrome b561 domain profile. | 48 | 254 | IPR006593 | - | |
| Lac13g0449 | 278 | Pfam | Eukaryotic cytochrome b561 | 87 | 217 | IPR006593 | - | |
| Lac13g0449 | 278 | PANTHER | CYTOCHROME B561-RELATED | 2 | 259 | IPR043205 | GO:0016491(PANTHER)|GO:0016491(InterPro) | |
| Lac13g0449 | 278 | FunFam | Cytochrome b reductase 1 | 72 | 262 | - | - | |
| Lac13g0449 | 278 | SMART | 561_7 | 87 | 212 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac13g0449 | Lac-Chr13:3231072 | Lac8g2802 | Lac-Chr8:45221650 | 2.40E-44 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac13g0449 | K08360 | - | csv:101205948 | 393.66 |