Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0604 ATGTTAGAAGAAGTCATTGGCAGTACTTTTGCTCCACAGTCTTTACTCCATAGCTACAAGAGAAGCTTCAATGGCTTTGTTGTAAAGTTGACTGAAGTTGAAGCACATAAAGTTTCTAAAAGCAACATTATTGTCGGGGTACTCGACACCGGAATTTGGCCTGAATCTCCTAGTTTCAACGATAAAGGATATGGCCCACCACCACCCAAGTGGAAAGGCACTTGTGAAGCCTCACCCAATTTCTCTTGCATCAATAAAATCATCGGAGCTCGATCGTATCGCAGCGACGGTAAATGTCCTACGAAAGATATTGCAGGTCCAAGAGATTCGAACGGCCACGGGACGCAGACGGCCTCAACCGTGGCAGGAGGGTTGGTGAGGCGAGCGAGCATGTTGGGTCTCGGCCTTGGCACGGCGAGGGGCGGAGTCCCGTCGTCACGCATTGCCACTTACAAAGTATGTTGGTCCGATGGTTGCTTTGATGCCGACATTCTTGCTGCATTCGACGACGCCATTGCGGACGGGGTCGATATCCTCTCGATCTCCCTTGGGGGACGAGTGGTGAAAGATTACTTCAATGACTCCATAGCCATTGGAGCTTTCCATGCTATGAAGAAGGGAATCCTCACGTCAATTTCCGCCGGCAACGAGGGCCCCAGGGTTTTCAACGATTAA 675 50.22 MLEEVIGSTFAPQSLLHSYKRSFNGFVVKLTEVEAHKVSKSNIIVGVLDTGIWPESPSFNDKGYGPPPPKWKGTCEASPNFSCINKIIGARSYRSDGKCPTKDIAGPRDSNGHGTQTASTVAGGLVRRASMLGLGLGTARGGVPSSRIATYKVCWSDGCFDADILAAFDDAIADGVDILSISLGGRVVKDYFNDSIAIGAFHAMKKGILTSISAGNEGPRVFND 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4476506 4478544 - Lag0040400.1 Lac13g0604 591760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0604 224 SUPERFAMILY Subtilisin-like 37 219 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g0604 224 Pfam Peptidase inhibitor I9 10 47 IPR010259 -
Lac13g0604 224 Gene3D Peptidase S8/S53 domain 42 220 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g0604 224 ProSiteProfiles Serine proteases, subtilase domain profile. 13 224 - -
Lac13g0604 224 Pfam Subtilase family 41 218 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac13g0604 224 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 220 IPR045051 -
Lac13g0604 224 PRINTS Subtilisin serine protease family (S8) signature 40 59 IPR015500 -
Lac13g0604 224 PRINTS Subtilisin serine protease family (S8) signature 109 122 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0604 Lac-Chr13:4476506 Lac13g1036 Lac-Chr13:8817559 1.50E-94 dispersed
Lac13g0602 Lac-Chr13:4455069 Lac13g0604 Lac-Chr13:4476506 5.10E-97 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0604 - - - 0.0