Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0651 ATGGTTGGAAAAGACGAAGCAATCTGGTGTCGATCGAAGTCAATTCTTCGAGTCCGAGGTTTCAGTCGGTGCAAGAGAGCTCTGCCAATTTGCTTCATCGCCGCAGCGGAGAACGCTCGCATTTCGGCCATGAATTGTCTTCAAAGCCTTTCAATATCATCTTCTTTGCCGCTGCGAAGCTTCAAATGCGGACAGAGAAAGCCTGAATTCCAGCTCTGCAAACTGGCGATGAGGAACTTTACCGATCTACATCGACGTTCATCCATGAAGGCAGTATCTGGCTCTACATCAAGTGCTGAAGTGGATGATGCCGAGGCAAAGAAGGAAAAGGAGGAAGAGGAGGAAAAATCTGAGATATATAGTCATAACATGACAGAAGCTATGGGCGCTGTATTGACATATAGACATGAGCTTGGAATGAACTACAACTTCATTCGTCCAGATTTAATTGTAGGATCATGCCTACAGACTCCAGAGGATGTCGACAAGCTCCGCAGCATTGGAGTAAAAACAATTTTCTGCTTGCAGCAAGATCCAGATTTGGAATATTTTGGGGTTGACATTGGTGCTATAATAGCGTATACAAAGACGTTTCATGATATTGAACATCTGCGAGCTCAAATAAGGGATTTTGATGCATTTGACCTACGGCTAAGATTACCAGCTGTTGTAAGCAAATTACATAAAGCCATAAACCGAAATGGTGGAGTGACTTACATACATTGCACTGCTGGACTTGGAAGGGCTCCTGCTGTTGCGATGGCACATATGTTTTGGGTTCAAGGCTACAAACTCAATGACGCTTTAAAATTACTGCTGAGCAAACGCTCATGCTTCCCAAAAATAGATGCTATCAAAAGTGCAACGGCTGATATACTTTCAGGATTTAAAAAGAAGCCTATCACTTTATCATGGGAAGGTGGCCAATGCTCAACTGTAGAAGTATCTGGACTTGATATTGGATGGGGACAGTTCAGAAGCTGTTTATATCCTATAAAGAATTTGGACCATCTCGACATTTTTACCTGCGGGTGGTGTGAAGTTGTGGAATTAGGCATTGATTTGAGAGGGTATCAAGTTGTGGCTTAG 1089 43.16 MVGKDEAIWCRSKSILRVRGFSRCKRALPICFIAAAENARISAMNCLQSLSISSSLPLRSFKCGQRKPEFQLCKLAMRNFTDLHRRSSMKAVSGSTSSAEVDDAEAKKEKEEEEEKSEIYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGVKTIFCLQQDPDLEYFGVDIGAIIAYTKTFHDIEHLRAQIRDFDAFDLRLRLPAVVSKLHKAINRNGGVTYIHCTAGLGRAPAVAMAHMFWVQGYKLNDALKLLLSKRSCFPKIDAIKSATADILSGFKKKPITLSWEGGQCSTVEVSGLDIGWGQFRSCLYPIKNLDHLDIFTCGWCEVVELGIDLRGYQVVA 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4918769 4926613 + Lag0040447.1 Lac13g0651 591807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0651 362 CDD DSP_laforin-like 140 287 IPR045204 GO:0019203(InterPro)
Lac13g0651 362 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 134 312 - -
Lac13g0651 362 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 218 276 IPR000387 GO:0016311(InterPro)
Lac13g0651 362 Pfam Dual specificity phosphatase, catalytic domain 197 279 IPR000340 GO:0016311(InterPro)
Lac13g0651 362 SMART dsp_5 141 291 IPR020422 GO:0006470(InterPro)
Lac13g0651 362 MobiDBLite consensus disorder prediction 88 118 - -
Lac13g0651 362 ProSiteProfiles Dual specificity protein phosphatase domain profile. 141 298 IPR020422 GO:0006470(InterPro)
Lac13g0651 362 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 138 283 IPR029021 -
Lac13g0651 362 Gene3D Protein tyrosine phosphatase superfamily 130 314 IPR029021 -
Lac13g0651 362 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 46 325 IPR052832 GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER)
Lac13g0651 362 MobiDBLite consensus disorder prediction 101 118 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0651 Lac-Chr13:4918769 Lac13g1219 Lac-Chr13:10799857 4.50E-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0651 - - - 0.0