Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac13g0673 | ATGGAGGTCTCTGCAACAACTCAATTCAACATGAAGACCTTCACTCTGAAGCTCCTCAAGGGGTCCTGGTTCATGATGTTCGCCTCCTTCCTCATCATGTCCATGGCCGGAATCCCTTACATGTTCGGCCTCTACTCCTCCACCATCAAATCCGTCCTCGGCTACGACCAGACCACGCTCAACTTCATTAGCTTCTTCAAGGACGTCGGCACCACCGTCGGCATCCTCGCCGGCCTCATCAACGAGGTCACGCCGCCGTGGTCCATCCTGGCCATGGGCGCCGTCTTGAACTTCTTCGGCTACTTCATGATCTGGCTCTCCGTCACCGAGAAGATCCCCACGCACGTGTGGCTCATGTGCCTCTACATCTGCGTCGGCGCCAACGCCACCACGTTCGCCAACACCGGCGCCTTGGTCACCTGCGTCAAGAACTACCCGCAGCGGCGGGGCGTCGTCATCGGAATTCTCAAGGGGTACATGGGGTTGAGCGGCGCCATCGTCACGCAGCTGTACCATGCGATTTACGGGAACGATGAGAAGTCGCTGATTCTGCTGCTGGGGTGGCTGCCGGCGGTGATTTCGTTCGTGTTTCTGCCGACGGTGAGGCGGATGAGGGTGGAGCACGAGGCGGATGAGCTCAGGGTTTTCTATAGGTTTCTGTATATTTCTTTGGGCTTGGCTGGGTTTCTTATGATGATGATTATTCTGCAGCAGAAGTTTAGTTTTAGCCGTGGGGAGTACGGCGGAAGTGCGGCGGTCGTTACTTTCTTGCTGCTTTTGCCTGTGGCGGTCGTCGTCGCCCAGGAGTTTAAGGCGTGGCGGCGCTTGAATAAGCCGGTGGCGCTCGAGAATGGCGGTTCGGCCATGGGCTCACCACCATTGAAGAACACAACCCCAATGTCACTCCTCCCAAAGAAACCAAAGCAAGAACAAGAGCTCAAGACCCCACCAAAAGTCCAATGGTGGAAGAACGTCTTCAACCCTCCGCAACGAGGCGACGACTGGACCATCCTCCAAGCCCTCTTCAGCTTCGACATGTTCCTCCTCTTCCTGGCGACGGCGTGCGGCGTCGGCGGCACCCTCACCGCCATCGACAACCTCGGGCAGATCGGCGGCTCCCTCCACTACCCGAAGAAAAGCATCAGCACCTTCGTCTCCCTCGTCAGCATCTGGAACTACCTCGGCCGGGTCATGGCCGGCTTCCTCTCCGAACACTTGCTCATCAAATACAAATTCCCCCGTCCCCTCATGCTCACCATCGTCCTCCTCCTCTCCTGCGTCGCCCATCTCCTCATCGCCTTCGACCCCGCCGGCGGCCTCTACATCGCCTCCGTCCTCACCGGCTTCTGCTACGGCGCACAGTGGCCGCTGCTCTTCGCCATCGTGTCCGAGATCTTCGGCCTCAAGTACTACGCCACGCTCTACAACTTCGGCTCCGTCGCCAGCCCGGTGGGGCTGTACGTGCTCAACGTGAATGTGGCCGGATATTTGTACGACAAGGAGGCCAAGAAGCAGCTGGCGGCGGCGGGGAGGGTAAGGAAGATAGGGGAGGAGCTCAACTGTGATGGGGTTGCGTGTTTCAAGACGTCGTTTTTGATTATCACGGCGGTGACTGTGTTCGGGACTTTGGTGTCGTTGGCTTTGGTGTGGAGGACCAGGAAGTTTTATAGGAGTGATATTTATAGGAGGTATAGAGAGGCGGAGGAGGCGGCGGCGGTGGCGGCGGCGGCTTCGGAGGAGGAGGAGGACGGTGGTGGTGGGGTGAGGAATGGTGGGGTTTCGGTGGAGGAGTCGAAGAATGGGATTAAGCAATGA | 1815 | 58.18 | MEVSATTQFNMKTFTLKLLKGSWFMMFASFLIMSMAGIPYMFGLYSSTIKSVLGYDQTTLNFISFFKDVGTTVGILAGLINEVTPPWSILAMGAVLNFFGYFMIWLSVTEKIPTHVWLMCLYICVGANATTFANTGALVTCVKNYPQRRGVVIGILKGYMGLSGAIVTQLYHAIYGNDEKSLILLLGWLPAVISFVFLPTVRRMRVEHEADELRVFYRFLYISLGLAGFLMMMIILQQKFSFSRGEYGGSAAVVTFLLLLPVAVVVAQEFKAWRRLNKPVALENGGSAMGSPPLKNTTPMSLLPKKPKQEQELKTPPKVQWWKNVFNPPQRGDDWTILQALFSFDMFLLFLATACGVGGTLTAIDNLGQIGGSLHYPKKSISTFVSLVSIWNYLGRVMAGFLSEHLLIKYKFPRPLMLTIVLLLSCVAHLLIAFDPAGGLYIASVLTGFCYGAQWPLLFAIVSEIFGLKYYATLYNFGSVASPVGLYVLNVNVAGYLYDKEAKKQLAAAGRVRKIGEELNCDGVACFKTSFLIITAVTVFGTLVSLALVWRTRKFYRSDIYRRYREAEEAAAVAAAASEEEEDGGGGVRNGGVSVEESKNGIKQ | 604 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 5123155 | 5125885 | - | Lag0040469.1 | Lac13g0673 | 591829 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac13g0673 | 604 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 22 | 564 | - | GO:0016020(PANTHER) | |
| Lac13g0673 | 604 | SUPERFAMILY | MFS general substrate transporter | 14 | 208 | IPR036259 | - | |
| Lac13g0673 | 604 | MobiDBLite | consensus disorder prediction | 575 | 604 | - | - | |
| Lac13g0673 | 604 | SUPERFAMILY | MFS general substrate transporter | 252 | 555 | IPR036259 | - | |
| Lac13g0673 | 604 | CDD | MFS_Mch1p_like | 23 | 542 | - | - | |
| Lac13g0673 | 604 | MobiDBLite | consensus disorder prediction | 290 | 304 | - | - | |
| Lac13g0673 | 604 | Pfam | Major Facilitator Superfamily | 347 | 554 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
| Lac13g0673 | 604 | Pfam | Nodulin-like | 23 | 266 | IPR010658 | - | |
| Lac13g0673 | 604 | Gene3D | MFS general substrate transporter like domains | 295 | 585 | IPR036259 | - | |
| Lac13g0673 | 604 | MobiDBLite | consensus disorder prediction | 287 | 316 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac13g0673 | Lac-Chr13:5123155 | Lac13g0676 | Lac-Chr13:5152703 | 1.30E-209 | dispersed | |
| Lac13g0673 | Lac-Chr13:5123155 | Lac13g0675 | Lac-Chr13:5137824 | 1.50E-200 | proximal | |
| Lac13g0673 | Lac-Chr13:5123155 | Lac8g2375 | Lac-Chr8:41858954 | 6.00E-218 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac13g0673 | - | - | - | 0.0 |