Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0676 ATGGTCGCCGCCGGTCCGGGAGGCGGCGGAGGAATCTCCAGCTGCTCCGACATAAGAACCATCGCCGTCCACGTCATCACCGGGCGGTGGTTCGTGGTGTTCGCTTCACTTCTGATCATGGCGGCCGCCGGCGCCACCTACATGTTCAGCCTCTATTCCAACGACATAAAGTCGGTTTTGGGGTACGATCAAACCACGTTGAATCTGTTGAGCTTTTTCAAGGATTTGGGTGCAAACGTCGGCGTTTTGTCCGGTCTTATCAATGAAGTTACGCCGCCGTGGGTGGTTCTCTCCATCGGCGCCGTCCTCAATTTCTTTGGTTACTTCATGATTTGGCTTGCCGTTACTAAGAGGATCTCCACCCCCAAAGTTTGGCAAATGTGTCTCTATATTTGTGTTGGAGCTAATTCTCAATCCTTCGCCAACACCGGTTCGCTTGTTACTTGCGTCAAGAACTTCCCTGAAAGTCGGGGCGTCGTTCTCGGTATCTTAAAGGGCTACGTGGGGCTTAGCGGCGCCATAATCACACAACTCTTCCACGCCTTCTACGGCTCCGACACCAAATCCTTAATCCTCCTCATCGGATGGCTCCCGGCGGCCATTTCCTTCGCATTTCTCCGAACAATTCGGATCATGAAAGTCATCCGACACCCCAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCCCTCGCCCTCGCCGGATTCCTAATGCTAATGATCATCATAGAAAGCAAACTAATGTTCACTCAAAGCGAATTCGGCGCCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCCCTCGCCGTCGTCGTAATCGAAGAATACAACCTCTGGAAACTCAAAACCGCCGCCATTGGACCTCCAAATCCAGTCCAGATCATAACAGAGAAGCCAAGTATTCCAAAAACAGAGCATCAGAAACAAACCCAACAAAAACAAAAACAAAAGCAACCATCTTGCTGGACGACGATCTTCAGCCCGCCGGAACGCGGCGAGGATTTCACGATTCTCCAAGCTCTCTTCAGCATGGACATGTTCATTCTGTTCTTCTCTGCAATCTGCGGCGTCGGCGGCACGTTGACGGCGATCGACAATCTGGGTCAGATCGGAATGTCTTTAGGATATCCAAAAAGAAGCATCAGCACATTCGTGACACTCGTCAGCATTTGGAATTACCTCGGCCGAGTCGCCTCTGGTTTCGTCTCTGAAATTGTTCTAACCAAATACAAATTCCCTCGTCCTTTGATGCTTTCTTTGACTCTGCTTTTGTCCTGCGTCGGCCATTTGATGATCGCTTTCGATGTCCCAAATGGGCTTTACGTGGCTTCGATCGTCATCGGATTCTGCTTCGGCGCGCAGTGGCCGTTGCTTTTCGCAATAATTTCGGAGCTTTTCGGGTTGAAGTATTACTCTACGCTTTACAATTTCGGGTCAGTGGCGAGCCCGATTGGGCTTTATGTTCTGAACGTGAAAGTGGCGGGGAATTTCTACGACAGAGAGGCGGAGAAGCAGCTGATAGCAAAAGGGCTTGTGAGAAAAGCAGGGGAAGAGCTGAAGTGCTTTGGAGCAGAGTGCTTTAAGCTGTCGTTTATTGTGATTACGGGAGTTACTTTGTTGGGTATGCTTGTTTCGTTGATTTTAGTGATCAGAACGAGGAGTTTTTACAAGAGTGATATTTACAAGAAGTTCAGAGATGAAGCTGAGGCAGAGGTGGCCGGAAATGGCGCGGTGGTGGCCGCCGGAGCGCCGGAGGAGATGAGAAACCGATAG 1779 50.53 MVAAGPGGGGGISSCSDIRTIAVHVITGRWFVVFASLLIMAAAGATYMFSLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTKRISTPKVWQMCLYICVGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGSDTKSLILLIGWLPAAISFAFLRTIRIMKVIRHPNELKVFYNFLYISLALAGFLMLMIIIESKLMFTQSEFGASAAVVLLLLFLPLAVVVIEEYNLWKLKTAAIGPPNPVQIITEKPSIPKTEHQKQTQQKQKQKQPSCWTTIFSPPERGEDFTILQALFSMDMFILFFSAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFVSEIVLTKYKFPRPLMLSLTLLLSCVGHLMIAFDVPNGLYVASIVIGFCFGAQWPLLFAIISELFGLKYYSTLYNFGSVASPIGLYVLNVKVAGNFYDREAEKQLIAKGLVRKAGEELKCFGAECFKLSFIVITGVTLLGMLVSLILVIRTRSFYKSDIYKKFRDEAEAEVAGNGAVVAAGAPEEMRNR 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5152703 5155374 - Lag0040472.1 Lac13g0676 591832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0676 592 SUPERFAMILY MFS general substrate transporter 28 556 IPR036259 -
Lac13g0676 592 CDD MFS_Mch1p_like 28 544 - -
Lac13g0676 592 Gene3D MFS general substrate transporter like domains 343 559 IPR036259 -
Lac13g0676 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 567 - GO:0016020(PANTHER)
Lac13g0676 592 FunFam Nodulin family protein 339 560 - -
Lac13g0676 592 Pfam Nodulin-like 29 274 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2988 Lac-Chr10:44461487 Lac13g0676 Lac-Chr13:5152703 3.30E-205 dispersed
Lac13g0673 Lac-Chr13:5123155 Lac13g0676 Lac-Chr13:5152703 1.30E-209 dispersed
Lac13g0676 Lac-Chr13:5152703 Lac8g2375 Lac-Chr8:41858954 1.60E-215 dispersed
Lac13g0675 Lac-Chr13:5137824 Lac13g0676 Lac-Chr13:5152703 3.10E-304 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0676 - - - 0.0