Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0776 ATGGATCAATTTCCCAAAGAACTCAACAAAGAATTCTGCAACACCGAGAAATTTGAAAGAGAAGAAGAAGAAGACGACGAGGACGACGAGCAAGAAGATGGACAAGACGACTGGGACGATTGGAATGCAGACGAGGAAGAAGGCGAAGAAGCATTTGACTCGAATTTTCTGTGTCTGTTCTGCAACTCCAAGTATAGTGACTGCAACACGCTGTTCAGACATTGCAACTCGGTCCACTACTTCGATTTTCACGGCATTAGGAGGGCTCTGGGTTTAGACTTTTATGGTTCGTTTAAAACCATCAACTACATACGATCTCAGGTAGCAGAAAATAGGTGTTGGAGCTGTGGTCTCTTGTGTCAATCAAACCAGGATTTACAGAACCATTTACACAAAACATTCAATCTTAGTGACATCAAGGCTCTTTGGGATGATGATAAATATCTAAAACCCTTCAGGCAAGATGATCCCCTCCTGTACAGTTTTGCAGAAGACGAAGAGGATGATGACATTTCACTCATGAACAATACGGATACTGATGGAGGTAATTGCAATGTTGATGAAATGACTGGAGAAAGTCTTCCATTTCATCCAAACCGACACAAAGAAAATGGAATGGAAGATTGTAGTTCTACTTCACACGGTTATTCAAATGCTCCAAGCAACTTAGAGGCCGTGATGGAGAATACCGTGCAAACTACGGAAGCTATGGGATTAAATGATAAGATGCAAGAAGATGATCAATTAAAAATAGCCAGACGAAATTTTTATTCAAAGGATATCAAGAATGCAAATGAAAACTACTTTGGTTCATATAGCTCTTTTGGCATACACAGAGAGATGTTAAGCGACAAGGTCAGAATGGAAGCTTATATGCAAGCTATTTTGCAAAACCCCTCTCTCTTCCAAAATGCAGCTGTGATGGATGTAGGTTGTGGAACAGGCATACTTAGTCTCTTTGCTGCAAAAGCGGGTGCGTCAAGAGTTATTGCAGTTGAAGCAAGTGAAAAGATGGCAGCAGTGGCCACCCAAATTGCAAAAGACAATGGCCTTGGGCGGAATAGGAAACAGACTGGAGACTGCGGCATGTCAAGTGGGACTATAGAAGTGGTTCATGGTATGGTAGAAGAACTTGATAAGAACATAGAGATTCAGCCTCACAGTGTTGACGTATTATTGAGTGAATGGATGGGCTACTGCTTGCTGTATGAGTCAATGCTCAGCTCAGTTCTCTTTGCAAGGGATCGTTGGTTGAAGCCTGGAGGTGCAATCTTACCAGATACTGCCACAATTCTTGTTGCAGGATTTGGAGTTGGTGGAACTAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAGCATGTCTTGTGTAGGGAAGGAACTTGTAGAGGATGCTGCCAAAGGTCCCATCGTTGACATTGTGGATGCTAAAGATCTAGTAACTAGTGCTGCAATTCTTCATACTTTTGATCTAGCAACTATGCATCCTGACGAAGTAGACTTCACTGCAAGTACTGAGTTGGAACCAAATTTACATTCTCCTTCTAGCAACTCAGATAACGTTGAAGTTGAAACCTCTTGGTGTCATGGAGTTGTCCTATGGTTTGAAACTGGTTTTACAAGCAGATTTTGCAAAGAATCACCGGCTGTTCTGTCTACATCCCCATACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCAGAGAACCAATTGCTATAACATCTAGAAAATCTGCCAGCAACATATCAGCACCAGTAGGCAGCGATGCCTCCCCTGCTGTCAAAGTTCATTTGCGCCTTAGCATCGTCCGTGCGCCTGAACATCGAAGCATTGACATTTCACTGGAAACTACTGGGATTGCTGGTGATGGTAGGAAGCGTCACTGGCCTGTACAACTTTTCACACTAAGGTAG 1920 42.66 MDQFPKELNKEFCNTEKFEREEEEDDEDDEQEDGQDDWDDWNADEEEGEEAFDSNFLCLFCNSKYSDCNTLFRHCNSVHYFDFHGIRRALGLDFYGSFKTINYIRSQVAENRCWSCGLLCQSNQDLQNHLHKTFNLSDIKALWDDDKYLKPFRQDDPLLYSFAEDEEDDDISLMNNTDTDGGNCNVDEMTGESLPFHPNRHKENGMEDCSSTSHGYSNAPSNLEAVMENTVQTTEAMGLNDKMQEDDQLKIARRNFYSKDIKNANENYFGSYSSFGIHREMLSDKVRMEAYMQAILQNPSLFQNAAVMDVGCGTGILSLFAAKAGASRVIAVEASEKMAAVATQIAKDNGLGRNRKQTGDCGMSSGTIEVVHGMVEELDKNIEIQPHSVDVLLSEWMGYCLLYESMLSSVLFARDRWLKPGGAILPDTATILVAGFGVGGTSLPFWENVYGFSMSCVGKELVEDAAKGPIVDIVDAKDLVTSAAILHTFDLATMHPDEVDFTASTELEPNLHSPSSNSDNVEVETSWCHGVVLWFETGFTSRFCKESPAVLSTSPYTPKTHWSQTILTFREPIAITSRKSASNISAPVGSDASPAVKVHLRLSIVRAPEHRSIDISLETTGIAGDGRKRHWPVQLFTLR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6166014 6169604 + Lag0040572.1 Lac13g0776 591932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0776 639 MobiDBLite consensus disorder prediction 18 41 - -
Lac13g0776 639 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 271 577 IPR029063 -
Lac13g0776 639 Gene3D - 429 630 - -
Lac13g0776 639 CDD AdoMet_MTases 307 425 - -
Lac13g0776 639 Pfam Methyltransferase domain 307 422 IPR041698 -
Lac13g0776 639 MobiDBLite consensus disorder prediction 1 41 - -
Lac13g0776 639 Pfam C2H2 type zinc-finger (2 copies) 58 132 IPR041661 -
Lac13g0776 639 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 265 599 IPR025799 GO:0016274(InterPro)|GO:0018216(InterPro)
Lac13g0776 639 FunFam Protein arginine N-methyltransferase 6 261 426 - -
Lac13g0776 639 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 242 620 IPR025799 GO:0005634(PANTHER)|GO:0016274(InterPro)|GO:0018216(InterPro)
Lac13g0776 639 MobiDBLite consensus disorder prediction 1 17 - -
Lac13g0776 639 Gene3D Vaccinia Virus protein VP39 256 426 IPR029063 -
Lac13g0776 639 ProSitePatterns Zinc finger C2H2 type domain signature. 58 79 IPR013087 -
Lac13g0776 639 SUPERFAMILY beta-beta-alpha zinc fingers 33 170 IPR036236 -
Lac13g0776 639 Pfam Arginine methyltransferase oligomerization subdomain 428 579 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0776 Lac-Chr13:6166014 Lac3g0998 Lac-Chr3:8148031 4.30E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0776 K11436 - csv:101215999 1011.13