Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0802 ATGGGAAAGCTAAGCTTGAGCGGCTGCAATAGTTTCCTTGAGAATTCAAAACCTTACTTTGCCATGATATCCTTACAATTTGGATATGCTGGCATGAACATCATCTCCAAAGTCTCTCTTAGTAGAGGGATGAGCCATTACGTCCTCGTCGTTTATCGACATGCCTTCGCTACTGCTTCCATCGCCCCCTTCGTTCTCTTCTTCGAACGGAGAGGACAGCCAAGGATCACACTCAAAGTTTTCATTCAAATATTTGTGTTGGCTTTGCTTGGCCCGGTTATCGATCAAAATTTCTACTATGCTGGGCTAAAATACACCTCACCAACCTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTTGTGATGGCTGTGATCTTCAGGATGGAAAAATTGGACATGAAGAAAGTGAGATGCCAAGCAAAAATTTTGGGAACTTTAGTGACAGTGGTTGGAGCAATGCTGATGACTTTGTACAAAGGCCCACTTGTTCAAATGGCTTGGTCTAAACATTCTCATGCTTCCACAAACAATAATGTTTCTGATTCTAATGCCAACAAAGATTGGTTCAAAGGCTCCATTTTCCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTCTTGCAGAATCAGGCATTGAAGACATACAAGAACCACCAGTTCACTCTCACTACACTGGTGTGCTTTCTTGGGACTTTGCAGGCCATTGCTGTGACTTTGGTGGCTGAGCACAAAGCTTCTGTTTGGAGAATTGGTTGGGATATGAACCTTCTAGCTGCTGCCTATGCTGGAATTGTGACATCAAGTATTTCATATTATGTACAAGGGCTGGTGATGAAGAAGAGGGGACCTGTATTTGCAACTGCATTTAGCCCTTTGATGATGATCATTGTAGCCATCATGGGCTCTTTCATCCTTGCTGAAAAGATCTTTCTTGGAGGAATAATAGGATCCATCTTGATAGTATTTGGGCTATATTCAGTCCTTTGGGGAAAGCACAAGGAGAATTTGGAGAGCAAAAGTGCTTCTGTTGCTGATGAAATACCAGAAGCAATTAAAGCTAATAATTCTTCTCAACCAAATAATAATAATAATATTGCAAATCTTGAAGCTAATGAGATGATGATCAAAGCTCCCAATAAGCTAATTTCCAATAATAATTCAGTTTTCATTTCCATGCCTGACCCTGAAAACCCCATCAAACCCAACCAAATCCCAAGAGAATGA 1236 41.5 MGKLSLSGCNSFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERRGQPRITLKVFIQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLDMKKVRCQAKILGTLVTVVGAMLMTLYKGPLVQMAWSKHSHASTNNNVSDSNANKDWFKGSIFLIIATLAWASLFVLQNQALKTYKNHQFTLTTLVCFLGTLQAIAVTLVAEHKASVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFATAFSPLMMIIVAIMGSFILAEKIFLGGIIGSILIVFGLYSVLWGKHKENLESKSASVADEIPEAIKANNSSQPNNNNNIANLEANEMMIKAPNKLISNNNSVFISMPDPENPIKPNQIPRE 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6425042 6428154 + Lag0040598.1 Lac13g0802 591958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0802 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Lac13g0802 411 PANTHER WAT1-RELATED PROTEIN 20 348 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac13g0802 411 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020(InterPro)
Lac13g0802 411 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020(InterPro)
Lac13g0802 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 337 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g2189 Lac-Chr12:39017692 Lac13g0802 Lac-Chr13:6425042 4.10E-68 dispersed
Lac13g0224 Lac-Chr13:1610606 Lac13g0802 Lac-Chr13:6425042 5.80E-32 dispersed
Lac13g0802 Lac-Chr13:6425042 Lac1g1566 Lac-Chr1:36941275 7.40E-127 dispersed
Lac13g0802 Lac-Chr13:6425042 Lac10g2273 Lac-Chr10:34563910 2.10E-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0802 - - - 0.0