Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0863 ATGAGAGCTTTGAATATCCATTTTCTCATCTGGGTTCTGTGTGCTTTGTATTTATCACCATCTCTCTCATCAGGATTCTCTCCTGATGATAATTTTCTGATCGATTCTGGATCATCCTCCAATACTACAGTGGGAGGTCGTCTATTTCAACCTGATGATTTTTTCTCAGCTAATCTTTCAAACCCAAATGGGAAATTTCTTTCCACTACAAGCAAAGTATCTAGTTCATCTCCGTTTTTCTTATTTTCACCTCTCTTTCAAACTGCAAAAGTATTTGAAACAACATCCACATACAACTTCAAAATAAAGAAACAGGGCAGGCACTGGATCCGCCTCTACTTTTACCCTTTTGTTTCTGGAGACTTCAACTTGAGTTTAGCCAAATTCTCAGTTTCTGCTCAAAATATCACCCTTCTCAAAGAGTTTCAGATCGACAGCGGCTCGGAAGTCAAGGAATATTCTCTGAATGTCACTTCCAGTAATCTTGTTCTTACATTCACTCCCATGGTGAATTCATTTGCGTTCATCAATGCCTTGGAAGTTGTTTCTGTCCCTGATGAACTGATTCCCTCGTTTGTCCACACTGTTGAGAAACTTGAAGAAAGATTGGGGAACAGGGCACTGGAGACAGTTGCTAGAGTGAATATGGGCAATCAAACTGTGTCCCCGAATGACGATACTCTCTTGCGCCTTTGGGTTGCAGATGGTCCATTCTTGATGCATTATGATCAAGTTGTCGTTGGGAGGTTTGTGTCAAATCTCACGAGAGTGAACATGACAAAAGACTCTGAAATTAAGGCTCCCCGTAATGTGTATGGAACAGCAACTCAGTCAAGAGCTGATGGGGATACAAATGTTAATGTTAATGTATCATGGTCATTTGATGTCGATCCGGGCTACAAATATCTGATTCGTTTTCATTTCTGTGATATTATAGATCTTCCTCCTGGATCGCTGTTCTTCAATGTTTATGTTAACTCATGGAAGGTTAAAGATCATCTTGACATTAAGACTCTCACTTCAGGCATTCTAGGTGCACCCTATGTCCTGGACACCATAGCCAGCTCAACTGACAGCTCTAAGTTCAAAATAAGTGTTGGTCCATCCAATTTGGGTGATTACTCGGTTTCCATTCTTAACGGACTCGAGATCATGAAAATAAGCGATTCTCGGGGGAGCCTTGATGAACCCCCCTTAGATTTACCTTCAAAGAAAGGTTCAAATGTGAAAGTTGGTCTTATAGCAGGCTTGGTTGCTGGACTGGTTGTTGCTGCTGTTGTGGCCACTCTTGTAATCATGTTGTGCAGAAGAAGAAGGAGATTGGCGCTCGTTGGTCACTTGAAGGAAGAGGAAAATTTTGGTGTAAATGGAAGAGAAAGCAACTATAACATTGGATCTGTTGCCTTTTCAAGCTCAAAGATTGGTTATCGATATCCTCTTGCAGCTATTCTGGAAGCCACTGATCATTTTAGTGAAAGTTTAGCCATTGGCGTTGGTGGTTTTGGGAAAGTTTACAAAGGAGTGTTGAGGGACAACACAGAAGTGGCAGTGAAAAGAGGGGCTTCAAAATCTCAGCAAGGTCTTGCAGAGTTTCAAACCGAAATCGAGATGTTATCCCAATTTCGTCACCGTCATTTGGTATCTCTGATCGGGTACTGCGATGAGCAAAACGAGATGATTATAATTTATGAATACATGGAAAAAGGGACTCTCAAGGACCATTTGTATGGATCAGAACTTCCAAGTTTAAGCTGGAAACAAAGGCTTGAGATTTGCATTGGCTCAGCCAGAGGACTTCACTATCTTCACACTGGCTCCACAAAGGCAATCATACACAGAGATGTCAAAACTGCAAATATTCTTCTAGATCAAAACTACATGGCCAAAGTTGCAGACTTCGGACTCTCTAAGACTGGCCCTGAATTGGACAAGACTCATGTCAGTACAGCGGTAAAGGGAAGCTTCGGCTATCTCGATCCCGAGTATTTAACAACACAACAACTAACCGAGAAATCCGATGTCTACTCTTTTGGTGTGGTTATGTTTGAAGTCCTTTGTGGTAGGCCTGTCATTGATCCATCTCTCCCAAGGGAAAGGGTGAATTTAATTGAATGGGTAATGAGGAGGAATGATAGAGATCAACTGGAGGCGATCGTAGACGCTCGTATCGTCGAGCAAATCAAGCTAGACTCTCTGAGAAAATACGTAGAGACAGCCGAGAACTGCTTGGCAGAATGCGGTGTGGATCGCCCGACGATGGGAAACGTTCTGTGGAATCTGGAGTGTGCATTCCAACTCCAAGGGGATGAAAGATCTCGTCATGGCAAGGAATCATCCTCACAAGCTGATCTTTCAAACCACTGGGAGGCGAGCGTTTCGACGACTCAATTCAACACAGGGAGCGCGGTTGATATCGTCGGTATTTCGATGAGTAAGGTATTTGCTCAAATGGTGAGGGAAGACATGAGATAG 2472 42.76 MRALNIHFLIWVLCALYLSPSLSSGFSPDDNFLIDSGSSSNTTVGGRLFQPDDFFSANLSNPNGKFLSTTSKVSSSSPFFLFSPLFQTAKVFETTSTYNFKIKKQGRHWIRLYFYPFVSGDFNLSLAKFSVSAQNITLLKEFQIDSGSEVKEYSLNVTSSNLVLTFTPMVNSFAFINALEVVSVPDELIPSFVHTVEKLEERLGNRALETVARVNMGNQTVSPNDDTLLRLWVADGPFLMHYDQVVVGRFVSNLTRVNMTKDSEIKAPRNVYGTATQSRADGDTNVNVNVSWSFDVDPGYKYLIRFHFCDIIDLPPGSLFFNVYVNSWKVKDHLDIKTLTSGILGAPYVLDTIASSTDSSKFKISVGPSNLGDYSVSILNGLEIMKISDSRGSLDEPPLDLPSKKGSNVKVGLIAGLVAGLVVAAVVATLVIMLCRRRRRLALVGHLKEEENFGVNGRESNYNIGSVAFSSSKIGYRYPLAAILEATDHFSESLAIGVGGFGKVYKGVLRDNTEVAVKRGASKSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEQNEMIIIYEYMEKGTLKDHLYGSELPSLSWKQRLEICIGSARGLHYLHTGSTKAIIHRDVKTANILLDQNYMAKVADFGLSKTGPELDKTHVSTAVKGSFGYLDPEYLTTQQLTEKSDVYSFGVVMFEVLCGRPVIDPSLPRERVNLIEWVMRRNDRDQLEAIVDARIVEQIKLDSLRKYVETAENCLAECGVDRPTMGNVLWNLECAFQLQGDERSRHGKESSSQADLSNHWEASVSTTQFNTGSAVDIVGISMSKVFAQMVREDMR 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7023703 7026174 + Lag0040659.1 Lac13g0863 592019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0863 823 Pfam Protein tyrosine and serine/threonine kinase 495 689 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac13g0863 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac13g0863 823 FunFam Receptor-like protein kinase FERONIA 566 782 - -
Lac13g0863 823 FunFam Receptor-like protein kinase FERONIA 207 389 - -
Lac13g0863 823 SUPERFAMILY Protein kinase-like (PK-like) 473 760 IPR011009 -
Lac13g0863 823 Gene3D - 206 388 - -
Lac13g0863 823 Gene3D - 31 184 - -
Lac13g0863 823 Pfam Malectin-like domain 82 387 IPR024788 -
Lac13g0863 823 FunFam Putative receptor-like protein kinase 31 185 - -
Lac13g0863 823 FunFam receptor-like protein kinase FERONIA 456 565 - -
Lac13g0863 823 ProSiteProfiles Protein kinase domain profile. 490 764 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac13g0863 823 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524(InterPro)
Lac13g0863 823 Gene3D Phosphorylase Kinase; domain 1 455 565 - -
Lac13g0863 823 SMART serkin_6 490 763 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac13g0863 823 CDD STKc_IRAK 496 761 - -
Lac13g0863 823 PANTHER OS07G0166700 PROTEIN 478 767 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Lac13g0863 823 Gene3D Transferase(Phosphotransferase) domain 1 566 787 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0863 Lac-Chr13:7023703 Lac9g2521 Lac-Chr9:43902846 2.50E-222 dispersed
Lac13g0863 Lac-Chr13:7023703 Lac4g2841 Lac-Chr4:47036274 8.90E-164 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85860 PF12819 Malectin_like 3.00E-31 CL0202 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0863 - - - 0.0