Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0924 ATGGTTCTCGAAGTTGCGGTCAAGGCTGCCGTTGGCGCCCCCGATGTGATCGGGGACTGCCCTTTCAGCCAAAGGGTTCTCTTAACTTTAGAGGAGAAGAAAGTTGCTTACAAGAGGCATCTCATCAATCTCTCTGACAAACCCAGTTGGTTCTTGGAAGTGAACCCTGAAGGGAAGGTGCCGGTTGTGAAGTTTGATGATAAATGGGTTTCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCGCTTGTTACTCCTCCTGAAGTTTCTTCTGTGGGATCAAAGATATTTGGTGCTTTTGTAACATTCTTGAAGAGCAAGGACCCGAATGATGGTTCAGAGAAGGCTTTCCTTGAAGAGTTGAAGGCGCTCAATGAGCATCTTAAGGCTCATGGTCCTTACGTCGCTGGACAGAAGGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATGTTGATGTTGCTCTCGGCCATTTTAAGAAGTGGGCTATCCCAAAGACTTAG 528 46.78 MVLEVAVKAAVGAPDVIGDCPFSQRVLLTLEEKKVAYKRHLINLSDKPSWFLEVNPEGKVPVVKFDDKWVSDSDVIVGILEEKYPEPSLVTPPEVSSVGSKIFGAFVTFLKSKDPNDGSEKAFLEELKALNEHLKAHGPYVAGQKVTAVDLSLAPKLYHVDVALGHFKKWAIPKT 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7647756 7650069 + Lag0040720.1 Lac13g0924 592080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0924 175 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Lac13g0924 175 SFLD Main (cytGST) 19 167 - -
Lac13g0924 175 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Lac13g0924 175 CDD GST_N_family 20 77 - -
Lac13g0924 175 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 174 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(InterPro)|GO:0045174(PANTHER)|GO:0098869(InterPro)
Lac13g0924 175 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Lac13g0924 175 Gene3D Glutaredoxin 1 89 - -
Lac13g0924 175 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 175 - -
Lac13g0924 175 Pfam Glutathione S-transferase, C-terminal domain 119 167 - -
Lac13g0924 175 SUPERFAMILY GST C-terminal domain-like 84 174 IPR036282 -
Lac13g0924 175 Gene3D - 90 175 - -
Lac13g0924 175 SFLD Glutathione Transferase (cytosolic) 19 167 IPR040079 -
Lac13g0924 175 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0924 Lac-Chr13:7647756 Lac13g0926 Lac-Chr13:7669753 4.30E-84 dispersed
Lac13g0924 Lac-Chr13:7647756 Lac13g0925 Lac-Chr13:7661525 4.00E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0924 K21888 - mdm:103435916 306.605