Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0925 ATGGTTAGGAAATATTTAGCCCCACCATGGGTTGCCACTCTAGCGGGTCCCCACAAGTTCTTGGAAGTGAGCCCAGAAGGAAAGGTGGCGGTGGCGAAGATTGATGACAAATGGGTTCCTGACTCGGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTTACCCTTCCTGAATTTTCTTCTGTGGGATCAAAGATAAATGGGGCTTTTGTAAAATTCTTGAAGAGCAAGGACCCAAATGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAATGCGTTGGACGAGCATCTTAAGGCACACGGTCCTTATGTTGCTGGAGAGAAGGTTACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACAGTCTTGATATTGCTCTTGGCCATTTCAAGGAGTGGACTTTCCCTGAAAACTTAACCAGTTTATCCGCATACAAAGAGTTGCTTTTTGCTCGAGAATCTTTCATGAAGACGAAGTCTGCCCCCGAACATGTAATTTCTGGTTGGGAGCCCAAGATTCAAACACTCCCCCACTGCCCACTTGATTTGGTCCTTGAAGCTGCGGTCAAGGCTGCCGTTGGTGCCCCCGATGTAATTGGGGACTGCCCTTTCAGCCATAGGGTTCTCTTAACTTTAGAGGAGAAGAAAGTTGCCTACAAAATGCATCTCATTGATCTCTCTGACAAACCCAGCTGGTTCTTGGAAGTGAGCCCTGAAGGGAAGGTGCCGGTTGTGAAGTTTGATGATAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCGCTTGTTACTCCTCCTGAAGTTTCTTCTGTGGGATCAGAGATATTTGGTGCCTTTGTAACATTCTTGAAGAGCAAGGACCCAGATGATGGTTCAGAGCAGGCTTTCCTTGAAGAGTTGAAGGCGTTCGATGAGCATCTTAAGGCTCATGGTCCTTACGTCGCTGGAGAGAAGGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATGTTGATGTTGCTCTTGGCCATTTCAAGGAGTGGGCTATCCCCAAAGACTTAGATAGTTTAATCGCCTACAAAGAGTTGCTTTTCGCTCGAGAATCTTTCGTGAAGACGAAGGCTGCCCCGGAACATGTAATTGCTGGATGGGAGCCCAAGGTGAATCCTGCATGA 1206 47.01 MVRKYLAPPWVATLAGPHKFLEVSPEGKVAVAKIDDKWVPDSDVIVGILEEKYPEPSLVTLPEFSSVGSKINGAFVKFLKSKDPNDGSEQALLEELNALDEHLKAHGPYVAGEKVTAVDLSLAPKLYSLDIALGHFKEWTFPENLTSLSAYKELLFARESFMKTKSAPEHVISGWEPKIQTLPHCPLDLVLEAAVKAAVGAPDVIGDCPFSHRVLLTLEEKKVAYKMHLIDLSDKPSWFLEVSPEGKVPVVKFDDKWVPDSDVIVGILEEKYPEPSLVTPPEVSSVGSEIFGAFVTFLKSKDPDDGSEQAFLEELKAFDEHLKAHGPYVAGEKVTAVDLSLAPKLYHVDVALGHFKEWAIPKDLDSLIAYKELLFARESFVKTKAAPEHVIAGWEPKVNPA 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7661525 7667520 + Lag0040721.1 Lac13g0925 592081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0925 401 SUPERFAMILY GST C-terminal domain-like 287 399 IPR036282 -
Lac13g0925 401 Pfam Glutathione S-transferase, C-terminal domain 88 151 - -
Lac13g0925 401 Pfam Glutathione S-transferase, C-terminal domain 308 370 - -
Lac13g0925 401 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 53 181 IPR010987 -
Lac13g0925 401 FunFam Glutathione S-transferase DHAR3 chloroplastic 189 277 - -
Lac13g0925 401 Gene3D Glutaredoxin 9 58 - -
Lac13g0925 401 Gene3D Glutaredoxin 189 277 - -
Lac13g0925 401 CDD GST_N_family 208 265 - -
Lac13g0925 401 SFLD Glutathione Transferase (cytosolic) 207 354 IPR040079 -
Lac13g0925 401 Pfam Glutathione S-transferase, N-terminal domain 208 270 IPR004045 -
Lac13g0925 401 SUPERFAMILY Thioredoxin-like 207 275 IPR036249 -
Lac13g0925 401 Gene3D - 278 400 - -
Lac13g0925 401 Gene3D - 59 181 - -
Lac13g0925 401 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 191 397 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(InterPro)|GO:0045174(PANTHER)|GO:0098869(InterPro)
Lac13g0925 401 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 198 276 IPR004045 -
Lac13g0925 401 FunFam Glutathione S-transferase DHAR3, chloroplastic 278 400 - -
Lac13g0925 401 SFLD Main (cytGST) 207 354 - -
Lac13g0925 401 FunFam Glutathione S-transferase DHAR3, chloroplastic 59 181 - -
Lac13g0925 401 SUPERFAMILY GST C-terminal domain-like 68 179 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0205 Lac-Chr11:1994550 Lac13g0925 Lac-Chr13:7661525 5.40E-74 dispersed
Lac13g0925 Lac-Chr13:7661525 Lac5g1134 Lac-Chr5:19369137 3.80E-27 dispersed
Lac13g0924 Lac-Chr13:7647756 Lac13g0925 Lac-Chr13:7661525 4.00E-90 tandem
Lac13g0925 Lac-Chr13:7661525 Lac13g0926 Lac-Chr13:7669753 1.80E-101 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0925 K21888 - csv:101203666 373.244