Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0926 ATGGCCATTGAAGTTGCTGTCAAGGCTGCCGCTGGTGCACCTGATGTTATTGGAGACTGCCCTTTCACCCAGAGGGTTCTATTAACTTTGGAGGAGAAGAAAGTTCCTTACAAATTGCACCTCGTCAATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTTAGCCCTGAAGGGAAGGTGCCGGTGGCGAAGATTGATGACAAATGGGTTCCTGACTCTGATGTCATCGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTTACCCTTCCTGAATTTTCTTCTGTGGGATCAAAGATAAATGGTGCTTTTGTAAAATTCTTGAAAAGCAAGGACCCAAATGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAACGCGTTGGACGAGCATCTTAAGGCACACGGTCCTTATGTTGCTGGAGAGAAGGTTACTGCTGTTGATTTGAGTCTGGCACCAAAATTGTACCATCTGGATATTGCTCTTGGCCATTTCAAGAAGTGGACTTTCCCCCAAAACTTAACCAGTTTATCCGCATACAAAGAGTTGCTTTTCGCTCGAGAATCTTTCGTGAAGACGAAGGCTGCCCCCGAACATGTAATTTCTGGTTGGGAGCTCAAGGTGAATGCTGCATGA 642 45.95 MAIEVAVKAAAGAPDVIGDCPFTQRVLLTLEEKKVPYKLHLVNLSDKPSWFLEVSPEGKVPVAKIDDKWVPDSDVIVGILEEKYPEPSLVTLPEFSSVGSKINGAFVKFLKSKDPNDGSEQALLEELNALDEHLKAHGPYVAGEKVTAVDLSLAPKLYHLDIALGHFKKWTFPQNLTSLSAYKELLFARESFVKTKAAPEHVISGWELKVNAA 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7669753 7672189 + Lag0040722.1 Lac13g0926 592082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0926 213 Gene3D - 90 212 - -
Lac13g0926 213 CDD GST_N_family 20 77 - -
Lac13g0926 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Lac13g0926 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 84 212 IPR010987 -
Lac13g0926 213 Gene3D Glutaredoxin 1 89 - -
Lac13g0926 213 SUPERFAMILY GST C-terminal domain-like 99 206 IPR036282 -
Lac13g0926 213 SFLD Glutathione Transferase (cytosolic) 19 169 IPR040079 -
Lac13g0926 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 207 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(InterPro)|GO:0045174(PANTHER)|GO:0098869(InterPro)
Lac13g0926 213 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Lac13g0926 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 212 - -
Lac13g0926 213 Pfam Glutathione S-transferase, C-terminal domain 119 181 - -
Lac13g0926 213 SFLD Main (cytGST) 19 169 - -
Lac13g0926 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Lac13g0926 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0924 Lac-Chr13:7647756 Lac13g0926 Lac-Chr13:7669753 4.30E-84 dispersed
Lac13g0926 Lac-Chr13:7669753 Lac5g1134 Lac-Chr5:19369137 6.70E-23 dispersed
Lac13g0925 Lac-Chr13:7661525 Lac13g0926 Lac-Chr13:7669753 1.80E-101 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0926 K21888 - csv:101203666 353.599