Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac13g0933 | ATGGTGGGCTCTGAGGAGGACTCTGGTACTTCTGGGGCCGCGGTGCAGCTTTCTGGTGGCAGTCGCAAATTGTTCTGGCGTTCGGCCTCATGGTCTGCGTCACGTTCCTCCCTTCACCATCCCGAAGTCAACAAAGATGGTGGAGACCCGAATGGGAATCTTGGTGATAGTAATGGACCAAGCCGAATCTTCCCCGCTCCATTGACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTGCAGCCTTTGTCGATAGCCCGGCGAAGCTTAGATGAATGGCCGAAGGCAGGGTCGGACGATATAGGCGAGTGGCCACAACCTCCTACTCCAAGTGGCAGAGGAAATGGCGAGAGGTTGAAACTTGATTTGTCAACAATTCAGAGGAACCCGGATAAGAATTGTGGGCTTGTCAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGCTCAAAAGTGGCGGAACATGTATATCTTGGTGGAGATGCGGTTGCTCGAGATAGGGATATACTTAAACAGAATGGAATCACTCATGTGTTGAATTGTGTAGGTTTCGTTTGCCCGGAGTACTTCAAAGATGATTTCGTGTACAGAACTTTATGGTTGCAGGATAGCCCATCTGAGGATATCACTAGTATTCTTTATGACGTTTTTGACTATTTTGAAGATGTTAGAGAACAAAGTGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCTCGGTCCACGTCATTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGACGATGCATTTCAATATGTGAAGGCAGCAAGAGGTATCGCTGACCCGAATATGGGTTTTGCTTGCCAGTTATTACAGTGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCAAGTTCACTGTTGAGAATGTATAGAGTTGCCCCACATTCACCATATGATCCTTTGCATCTGGTCCCGAAAATGTTGAATGATCCTTCACCCTCTGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCCTCTGCTATATTTGTTTGGATCGGTAAGAACTGTGAAGCAATCATGGAAAGGGATGCAAGGGGAGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAACAAACTTTTGGGATTCTTTTGCAAACCTGTTACCTCTAATGGATAAATCTAACAGTAAAATAAATCTTGGGGAATTAAAAGGTAAGCCTTCTCCAGGCGAGAGGAAAGTTGATTCCTATGATGTGGATTTTGAAATTTTCCAGAAGGCTATTACTGGTGGTTTTGTTCCTCCATTTCCTTCGTCTGAGAATGAGCATGAGACCCATCTTCCTGTTAGAGAAAGCAGTTGGAGTATGCTTAGGCGTAAGTTTGCCTCTGGGAATATGAAAGAGTTTGTATCAGCTCCTCGAATATCTCTCTCTAGGGTCTATTCAGACTCGTTGATGATGGTGCATTTTTCTGCAAAGTCTTCATCGCCTTCAGCATTTTCTTTGTCTTCATCATCTTCTTCACCCATCTATCTTTCTCCAGACTCCCTCTCTTCTGATTCAAGTTCAAGTTCAAGTTCAAGTTCCAAGTATTTCTCAGAATCCTCTTTAGATTCTCCATCTGCTTCTTCACCTTCAGTTCCAATTTCTTCATCTCTGTCTAGTTTTTCAAACATGTCTCTTATCTCATCCAATAGTTCCTTAGAATCTGTGCCCAATGGTCCAGAAACTCGTGATGCAGCCCCTCTGGAATCAAGTTCTAGCTCATTCTCATTCCCATCCAAAAAGTTCTCACCTTCACTTGCAGAGCGCCGAGGTAGTGCAAAATCTCTGACATTGCCTACAATGCCTAGTAAAATCAGAGCAACAAATAGTGCCTCAAGGTTTCTTGCCACTCAAGAAGATGGTAAGAGGAAAAATAAGATTTCCTGCTCTCTTAATGTATCATCAATTAATATGAAAAATGGCTCAGAGCCTATGGATAGGGTTGTAAATGAACCGACAAGTTCCACTCAGAATTTCAAGAATACCGAAAATGGAATGGATGTAAGGGTAGGTAGTGTGGCCTCATGCCAGCAGGAAACTAAAGTTGATGGACAATCTGCTTCATGGAAAGGCTATCCCAAACCTTTTGAAGAAGACATGGTGTCCACTGTGTCAAATGGGAAGCAAGATGATGAGTTTGTCCAACCTATGGTATACTGTTGGCCGGAGTTGGAAAAGATTGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTGTAGTGATTTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGACGACATGATGCTGTATATTTGGGTAGGAAGTTCTTTTGACCATGATTTACCTCAGGTTCAAGTAAAGAGGGATAAAGACTTGGTTGATTTAGAAAAGATAGACTGGATTAAAGTTGGTCAATATGTACTTACTGAAATAGGTCTGCCAGAAAATACAGAAATTAAGATCATTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGAGTCTGTTGTAG | 2565 | 43.0 | MVGSEEDSGTSGAAVQLSGGSRKLFWRSASWSASRSSLHHPEVNKDGGDPNGNLGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQSGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRVAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLPLMDKSNSKINLGELKGKPSPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSMLRRKFASGNMKEFVSAPRISLSRVYSDSLMMVHFSAKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSSSSSSSKYFSESSLDSPSASSPSVPISSSLSSFSNMSLISSNSSLESVPNGPETRDAAPLESSSSSFSFPSKKFSPSLAERRGSAKSLTLPTMPSKIRATNSASRFLATQEDGKRKNKISCSLNVSSINMKNGSEPMDRVVNEPTSSTQNFKNTENGMDVRVGSVASCQQETKVDGQSASWKGYPKPFEEDMVSTVSNGKQDDEFVQPMVYCWPELEKIAAFDTSYLNSKAAVVIFSPSRYLGKKDDMMLYIWVGSSFDHDLPQVQVKRDKDLVDLEKIDWIKVGQYVLTEIGLPENTEIKIIKEGEETEEFLARLSLL | 854 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 7744620 | 7748192 | + | Lag0040729.1 | Lac13g0933 | 592089 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac13g0933 | 854 | PANTHER | MKPA PROTEIN | 14 | 849 | - | - | |
Lac13g0933 | 854 | MobiDBLite | consensus disorder prediction | 33 | 70 | - | - | |
Lac13g0933 | 854 | SUPERFAMILY | Actin depolymerizing proteins | 300 | 401 | - | - | |
Lac13g0933 | 854 | CDD | DSP | 154 | 288 | - | - | |
Lac13g0933 | 854 | MobiDBLite | consensus disorder prediction | 528 | 557 | - | - | |
Lac13g0933 | 854 | MobiDBLite | consensus disorder prediction | 100 | 120 | - | - | |
Lac13g0933 | 854 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 153 | 295 | IPR020422 | GO:0006470(InterPro) | |
Lac13g0933 | 854 | MobiDBLite | consensus disorder prediction | 577 | 629 | - | - | |
Lac13g0933 | 854 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 237 | 247 | IPR016130 | GO:0016311(InterPro) | |
Lac13g0933 | 854 | MobiDBLite | consensus disorder prediction | 592 | 608 | - | - | |
Lac13g0933 | 854 | SMART | VILL_6 | 302 | 399 | IPR007122 | GO:0051015(InterPro) | |
Lac13g0933 | 854 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 212 | 273 | IPR000387 | GO:0016311(InterPro) | |
Lac13g0933 | 854 | Gene3D | Protein tyrosine phosphatase superfamily | 140 | 295 | IPR029021 | - | |
Lac13g0933 | 854 | SMART | dsp_5 | 153 | 292 | IPR020422 | GO:0006470(InterPro) | |
Lac13g0933 | 854 | Gene3D | Severin | 304 | 399 | IPR029006 | - | |
Lac13g0933 | 854 | Pfam | Dual specificity phosphatase, catalytic domain | 161 | 291 | IPR000340 | GO:0016311(InterPro) | |
Lac13g0933 | 854 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 148 | 294 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g0147 | Lac-Chr13:1063226 | Lac13g0933 | Lac-Chr13:7744620 | 8.30E-158 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac13g0933 | - | - | - | 0.0 |