Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0962 ATGTCTTTCCAGCATAAAAGCTTTTGGATACCTAGGGATGCTGGATGTTTAACTGATGGAGAGATGAACTATGATAGCTCCTCCAGAATTGAAAACAAGCGTGGCCATCAATGGTTTATGGATGGCAGTGCTCAAGAGCTATTCAGTAGCAAGAAGCAAGCAATAGAAACTGTAAATACTAGACCTGTTCCAGGAGTTCCGCACATGAATGTTTCTCCCTGGGAAAACTCTTCAAGTTTTCAGTCAGTTCCTGGGCCCTTCACTGATCGCCTCTTTGGCTCAGAGCCAATACGGACTGTCAACTTGGTTGATAGAGGCATCACTGTTGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTCGAGAATCATTTTGCAAACAACCCATCAGTTGGCTTGTCCATGTCTCAATCCATTGAGGATTCATCATCATGCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTCAATCAAGTCAGGGATCCTGACATTGGCATGTCTGCCTCTTTAGGGCATGCCTATAGCAGGGGTGATAATGGTACAATTTCAATGGGTACAACATTTAACAAAAATCATGAGAACGCCATATCATTGGGTCAAACTTATAATGCCAGAGATGAGAATAGCATCTCGGTTGGCCCTGCATTTCACAAGACAGATGACAATTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGAAATTTTATTACAATTGGTCATAACTATAGCAAGGGAGACAATAGCATCCTGTCAATGAGTCAGCCTTTTGACAAGGGGGATGATTCTTTTATTTCAATGGGTCAGTCTTATGAGAAGGCCGAGGGCAATATCATTTCTTTTGGTGCCTCCTACAATAAAGGGCATGAAAATTTTATCTCCATGGGGCCAACCTATAGTAAGGCAGGTGATACTTTCATTTCAATGGCTTCCTCCTACAATAAGGGAAATGATGATAGCTTATCAATGGGTCCAACCTATGACAAGGTGAACTCTGACATTGTACAAGTGGGTCCTAAATATGACAAAGCAGATTCTGGTGCTGTATCTATGGCTCACAACTATCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGTTTCGAAGATGAGAATGCCACAGATAATCCTTCTGGTGGGATCATTAGCAGTTACGACTTGTTGATGGCTAATCAGGCTGCTGCCCAAGCATCAGACGTGTCGACCCTGAGAGATTCAGTTGATCCTAATGTGGAAGTAAACATTAACAATGCCACAAAAGTCGATGGTAAAATCGATACAAGTTCCAGGAATAAAGAATCTAGGACGACTAAGAAGGTGCCACCAAATAGCTTCCCTTCAAATGTTAAAAGCCTGCTCTCAACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATAAAAGGGACTGGATATTTGTGCAGCTGTGACAATTGCAATCATTCTAAGGCTCTCAATGCTTATGAATTTGAGAGGCACGCTGGCTGCAAAACCAAACATCCAAATAATCACATTTATTTTGAGAATGGTAAAACTATCTATGCTGTTGTTCAAGAGCTAAAGAACACCCCCCAGGAGTTGCTATTTGATGCAATTCAGAATGTGACTGGCTCTCCCATTAATCAGAAGAATTTTCGTATTTGGAAAGCATCTTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAAAGATGAAGTAATTATGCCTTCTTGA 1755 41.2 MSFQHKSFWIPRDAGCLTDGEMNYDSSSRIENKRGHQWFMDGSAQELFSSKKQAIETVNTRPVPGVPHMNVSPWENSSSFQSVPGPFTDRLFGSEPIRTVNLVDRGITVGNANMDMGRKEFENHFANNPSVGLSMSQSIEDSSSCLNFGGIRKVKVNQVRDPDIGMSASLGHAYSRGDNGTISMGTTFNKNHENAISLGQTYNARDENSISVGPAFHKTDDNFISMGHAFSKGDGNFITIGHNYSKGDNSILSMSQPFDKGDDSFISMGQSYEKAEGNIISFGASYNKGHENFISMGPTYSKAGDTFISMASSYNKGNDDSLSMGPTYDKVNSDIVQVGPKYDKADSGAVSMAHNYHKGESNTISFGGFEDENATDNPSGGIISSYDLLMANQAAAQASDVSTLRDSVDPNVEVNINNATKVDGKIDTSSRNKESRTTKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQELLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGKDEVIMPS 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7982192 7987786 + Lag0040758.1 Lac13g0962 592118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0962 584 Gene3D - 152 298 IPR011049 -
Lac13g0962 584 Pfam Tify domain binding domain 477 532 IPR032308 -
Lac13g0962 584 MobiDBLite consensus disorder prediction 419 447 - -
Lac13g0962 584 PANTHER AUTOIMMUNE REGULATOR 6 565 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g3089 Lac-Chr10:45299837 Lac13g0962 Lac-Chr13:7982192 4.90E-40 transposed
Lac13g0962 Lac-Chr13:7982192 Lac9g2501 Lac-Chr9:43743485 6.20E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0962 - - - 0.0