Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac13g1040 | ATGCAGGTGTATGTTGTATACATGGGCAAATCATCTGAAGGAGATTTTACAGCAGCATCCGAACGACATACCAATATGCTTCAACAAGTTCTTACCACCAGTGATGCATCCAAATCTCTGGTGTATAGCTACCACCGGAGCTTCAGCGGCTTTGCAGCGAGGCTCAACGAGGAGGAGGCTCGGAAACTTGCCGAAATGGAGGAAGTTGTATCTGTGTTTCCGAGCGAAAAGAAAGAGCTTCACACGACAAGATCATGGGATTTCATGGGTTTGTTCGAAGAAGCTCGGAGAACGAGCTTGGAGAGCGATCTGGTCGTCGGAATGTTGGATACTGGAATTTGGCCGGAATCTGAAAGCTTTTCCGATGAAGGGTTTGGTCCGCCGCCGGCGAAGTGGAAAGGCGAATGCCAACCCTCTTCCAATTTCACCTGCAACAATAAAATAATCGGAGCTCGATTCTTCCGGAGCGAACCTTTCGAAGGCGAAGGCGACATTCTTTCTCCAAGAGATACAGAAGGCCATGGAACCCACACCTCATCCACCGCCGCCGGCAATTTGGTCTCCGGCGCCAGCCTCTTGGGCCTCGCCCTCGGCACCTCTCGCGGCGGCGCTCCCTCCGCCCGCATCGCCGTCTACAAGATCTGCTGGTCCGATGGCTGCTTCGACGCCGACATCCTCGCAGCTTTCGACAATGCAATCGCCGATGGCGTCGACATCATCTCCATTTCCGTCGGAGGTTTTATTGCCAAGAATTACTTCAACGACTCAATCGCCATTGGGGCTTTCCACGCGATGAAGAACGGGATTCTGACTTCAAATTCCGGCGGGAATTCTGGCCCTAGCCTTGCCAGTATCACCAATGTTTCTCCATGGTCGCTATCGGTGGCGGCTAGCACTATTGATAGGAAGTTCGTGACTAATGTGAAGTTGGGTAATGGACAAACCTTTCAGGGGATCTCCGTGAATACCTTCGATCTTGGAGATAAGTTGTTACCACTTATCTATGCTGGCGATGCTCCTAACAAAACTGCAGGTTTTAATGAATCGTTATCAAGGTTCTGCATCCCTGGTTCTTTGGATGTGAACCAAGTTCAGGGAAAGATTGTTCTTTGCGATGAGATTGGTGATGGAGAAGGAGCTTTGAATAGTGGTGCAGTTGGTACGATAATGCAAGATACTAATGACCAAGATGTTGCCTTTCTTTTCCCACTACCTGCTTCAAAGTTAGACTTGAACACCGGAAAGAAAGTTTTTGAGTACCTGAGATCAACCAGCAATCCGGAAGCTATCATAGAAAAGAGTACTACCATTAAGGATCTGCTAGCTCCATCTGTTGTTTCCTTCTCATCAAGGGGACCTAACCTTATTACACTGGACATTCTCAAGCCTGATTTGGCAGCACCAGGAGTGGATATACTAGCATCTTGGTCGGAAGCTTCAACAGCTACAAGTTTACCAGGGATAAAAGAATAG | 1473 | 48.74 | MQVYVVYMGKSSEGDFTAASERHTNMLQQVLTTSDASKSLVYSYHRSFSGFAARLNEEEARKLAEMEEVVSVFPSEKKELHTTRSWDFMGLFEEARRTSLESDLVVGMLDTGIWPESESFSDEGFGPPPAKWKGECQPSSNFTCNNKIIGARFFRSEPFEGEGDILSPRDTEGHGTHTSSTAAGNLVSGASLLGLALGTSRGGAPSARIAVYKICWSDGCFDADILAAFDNAIADGVDIISISVGGFIAKNYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLASITNVSPWSLSVAASTIDRKFVTNVKLGNGQTFQGISVNTFDLGDKLLPLIYAGDAPNKTAGFNESLSRFCIPGSLDVNQVQGKIVLCDEIGDGEGALNSGAVGTIMQDTNDQDVAFLFPLPASKLDLNTGKKVFEYLRSTSNPEAIIEKSTTIKDLLAPSVVSFSSRGPNLITLDILKPDLAAPGVDILASWSEASTATSLPGIKE | 490 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8853767 | 8859845 | + | Lag0040836.1 | Lac13g1040 | 592196 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac13g1040 | 490 | Pfam | Subtilase family | 103 | 484 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lac13g1040 | 490 | Pfam | Peptidase inhibitor I9 | 3 | 81 | IPR010259 | - | |
Lac13g1040 | 490 | CDD | PA_subtilisin_like | 307 | 431 | - | - | |
Lac13g1040 | 490 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 4 | 483 | IPR045051 | - | |
Lac13g1040 | 490 | FunFam | Subtilisin-like protease SBT5.3 | 1 | 81 | - | - | |
Lac13g1040 | 490 | FunFam | subtilisin-like protease SBT1.5 | 301 | 438 | - | - | |
Lac13g1040 | 490 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 81 | IPR037045 | - | |
Lac13g1040 | 490 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 85 | 490 | - | - | |
Lac13g1040 | 490 | Gene3D | - | 301 | 438 | - | - | |
Lac13g1040 | 490 | CDD | Peptidases_S8_3 | 78 | 300 | IPR034197 | - | |
Lac13g1040 | 490 | Gene3D | Peptidase S8/S53 domain | 103 | 483 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac13g1040 | 490 | SUPERFAMILY | Subtilisin-like | 80 | 477 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g1458 | Lac-Chr10:13970144 | Lac13g1040 | Lac-Chr13:8853767 | 5.10E-30 | dispersed | |
Lac13g1040 | Lac-Chr13:8853767 | Lac2g2679 | Lac-Chr2:41234342 | 3.70E-133 | dispersed | |
Lac13g1037 | Lac-Chr13:8837473 | Lac13g1040 | Lac-Chr13:8853767 | 3.00E-163 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac13g1040 | - | - | - | 0.0 |