Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g1040 ATGCAGGTGTATGTTGTATACATGGGCAAATCATCTGAAGGAGATTTTACAGCAGCATCCGAACGACATACCAATATGCTTCAACAAGTTCTTACCACCAGTGATGCATCCAAATCTCTGGTGTATAGCTACCACCGGAGCTTCAGCGGCTTTGCAGCGAGGCTCAACGAGGAGGAGGCTCGGAAACTTGCCGAAATGGAGGAAGTTGTATCTGTGTTTCCGAGCGAAAAGAAAGAGCTTCACACGACAAGATCATGGGATTTCATGGGTTTGTTCGAAGAAGCTCGGAGAACGAGCTTGGAGAGCGATCTGGTCGTCGGAATGTTGGATACTGGAATTTGGCCGGAATCTGAAAGCTTTTCCGATGAAGGGTTTGGTCCGCCGCCGGCGAAGTGGAAAGGCGAATGCCAACCCTCTTCCAATTTCACCTGCAACAATAAAATAATCGGAGCTCGATTCTTCCGGAGCGAACCTTTCGAAGGCGAAGGCGACATTCTTTCTCCAAGAGATACAGAAGGCCATGGAACCCACACCTCATCCACCGCCGCCGGCAATTTGGTCTCCGGCGCCAGCCTCTTGGGCCTCGCCCTCGGCACCTCTCGCGGCGGCGCTCCCTCCGCCCGCATCGCCGTCTACAAGATCTGCTGGTCCGATGGCTGCTTCGACGCCGACATCCTCGCAGCTTTCGACAATGCAATCGCCGATGGCGTCGACATCATCTCCATTTCCGTCGGAGGTTTTATTGCCAAGAATTACTTCAACGACTCAATCGCCATTGGGGCTTTCCACGCGATGAAGAACGGGATTCTGACTTCAAATTCCGGCGGGAATTCTGGCCCTAGCCTTGCCAGTATCACCAATGTTTCTCCATGGTCGCTATCGGTGGCGGCTAGCACTATTGATAGGAAGTTCGTGACTAATGTGAAGTTGGGTAATGGACAAACCTTTCAGGGGATCTCCGTGAATACCTTCGATCTTGGAGATAAGTTGTTACCACTTATCTATGCTGGCGATGCTCCTAACAAAACTGCAGGTTTTAATGAATCGTTATCAAGGTTCTGCATCCCTGGTTCTTTGGATGTGAACCAAGTTCAGGGAAAGATTGTTCTTTGCGATGAGATTGGTGATGGAGAAGGAGCTTTGAATAGTGGTGCAGTTGGTACGATAATGCAAGATACTAATGACCAAGATGTTGCCTTTCTTTTCCCACTACCTGCTTCAAAGTTAGACTTGAACACCGGAAAGAAAGTTTTTGAGTACCTGAGATCAACCAGCAATCCGGAAGCTATCATAGAAAAGAGTACTACCATTAAGGATCTGCTAGCTCCATCTGTTGTTTCCTTCTCATCAAGGGGACCTAACCTTATTACACTGGACATTCTCAAGCCTGATTTGGCAGCACCAGGAGTGGATATACTAGCATCTTGGTCGGAAGCTTCAACAGCTACAAGTTTACCAGGGATAAAAGAATAG 1473 48.74 MQVYVVYMGKSSEGDFTAASERHTNMLQQVLTTSDASKSLVYSYHRSFSGFAARLNEEEARKLAEMEEVVSVFPSEKKELHTTRSWDFMGLFEEARRTSLESDLVVGMLDTGIWPESESFSDEGFGPPPAKWKGECQPSSNFTCNNKIIGARFFRSEPFEGEGDILSPRDTEGHGTHTSSTAAGNLVSGASLLGLALGTSRGGAPSARIAVYKICWSDGCFDADILAAFDNAIADGVDIISISVGGFIAKNYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLASITNVSPWSLSVAASTIDRKFVTNVKLGNGQTFQGISVNTFDLGDKLLPLIYAGDAPNKTAGFNESLSRFCIPGSLDVNQVQGKIVLCDEIGDGEGALNSGAVGTIMQDTNDQDVAFLFPLPASKLDLNTGKKVFEYLRSTSNPEAIIEKSTTIKDLLAPSVVSFSSRGPNLITLDILKPDLAAPGVDILASWSEASTATSLPGIKE 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8853767 8859845 + Lag0040836.1 Lac13g1040 592196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g1040 490 Pfam Subtilase family 103 484 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac13g1040 490 Pfam Peptidase inhibitor I9 3 81 IPR010259 -
Lac13g1040 490 CDD PA_subtilisin_like 307 431 - -
Lac13g1040 490 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 483 IPR045051 -
Lac13g1040 490 FunFam Subtilisin-like protease SBT5.3 1 81 - -
Lac13g1040 490 FunFam subtilisin-like protease SBT1.5 301 438 - -
Lac13g1040 490 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 81 IPR037045 -
Lac13g1040 490 ProSiteProfiles Serine proteases, subtilase domain profile. 85 490 - -
Lac13g1040 490 Gene3D - 301 438 - -
Lac13g1040 490 CDD Peptidases_S8_3 78 300 IPR034197 -
Lac13g1040 490 Gene3D Peptidase S8/S53 domain 103 483 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1040 490 SUPERFAMILY Subtilisin-like 80 477 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1458 Lac-Chr10:13970144 Lac13g1040 Lac-Chr13:8853767 5.10E-30 dispersed
Lac13g1040 Lac-Chr13:8853767 Lac2g2679 Lac-Chr2:41234342 3.70E-133 dispersed
Lac13g1037 Lac-Chr13:8837473 Lac13g1040 Lac-Chr13:8853767 3.00E-163 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g1040 - - - 0.0