Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g1041 ATGGCTTGTCCACATGCAACAGGAGTAGCTGCGTATGTCAAATCTTTCCACCCAATTTGGTCTCCAGCTGCTATTAAGTCTGCACTTATGACAACAGCGATTCGCATGACTCCAAAGGTAAACACAGATGCTGAGTTTGCATATGGAGCAGGACACTTAAATCCAGTAAATGCCATCAACCCCGGTTTAGTCTATGATGCCGAAGAGATTGATTACATCAAGTTCTTATGTGGGCAAGGATATAGTACCGAAAATCTTCGTCTTGTTACCGGTGACCAAAGCAACTGTTCAGGTGTTACAAAAACAGCTGCATCAGATCTAAACTATCCATCTTTTGCTCTGTTGAGCAAGTCTAAAAGATCCTTTAGTCGTGTCTACCACAGGACCGTCACGAATGTCGGGCTGCCAAGGTCGACGTATAAAGCAGTCATTCAAGCTCCACCCGGGCTCAAAGTTACAGTACGTCCTGCTACTCTCTCTTTCAGTTCTCTTGGACAAAAGATATCTTTCACTGTGAGGGTTAAAGCAAAAGCTCCTGGTGGGAAGGTGATTTCTGGTAGTTTAACCTGGGATGATGGAGTGCATCTGGTGAGGAGCCCCATTGTTGCATTTGTTATTCCATTATGA 627 44.5 MACPHATGVAAYVKSFHPIWSPAAIKSALMTTAIRMTPKVNTDAEFAYGAGHLNPVNAINPGLVYDAEEIDYIKFLCGQGYSTENLRLVTGDQSNCSGVTKTAASDLNYPSFALLSKSKRSFSRVYHRTVTNVGLPRSTYKAVIQAPPGLKVTVRPATLSFSSLGQKISFTVRVKAKAPGGKVISGSLTWDDGVHLVRSPIVAFVIPL 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8859875 8861252 + Lag0040837.1 Lac13g1041 592197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g1041 208 Gene3D - 76 205 - -
Lac13g1041 208 ProSiteProfiles Serine proteases, subtilase domain profile. 1 59 - -
Lac13g1041 208 SUPERFAMILY Subtilisin-like 1 60 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1041 208 Pfam Subtilase family 1 51 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac13g1041 208 Pfam Fibronectin type-III domain 106 202 IPR041469 -
Lac13g1041 208 Gene3D Peptidase S8/S53 domain 1 72 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1041 208 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 202 IPR045051 -
Lac13g1041 208 FunFam Subtilisin-like protease SBT1.5 76 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1041 Lac-Chr13:8859875 Lac11g0056 Lac-Chr11:465701 9.10E-65 dispersed
Lac13g1037 Lac-Chr13:8837473 Lac13g1041 Lac-Chr13:8859875 9.40E-62 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g1041 - - - 0.0