Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac13g1221 | ATGATTATTTGTGACGGTGTATGTAGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTCCTCCACAGCAAGTTATGGGGAGGCGACACACGCTGCAGGGTCCTCCTGGGACTCTCAACACCATTACTCCATGTGCAGCCTGCAAGCTCTTGAGAAGAAGATGTGCTCAAGAATGCCCCTTCTCCCCTTACTTCTCCCCCCATGAGCCCCACAAGTTCGCCTCCGTCCACAAGGTCTTCGGCGCCAGCAACGTCTCCAAGATGCTCATGGAAGTTCCCGAGAATCAGAGAGCCGATGCTGCGAACAGCCTAGTTTATGAAGCTAATGTGAGGCTGAGAGATCCTGTCTATGGCTGCATGGGAGCCATTTCAGCTTTACAACACCAAATTCAAGCTTTACAAGCTGAGCTCAATGCAGTTAGAGCTGAGATATTGAGATACAAATATAGAGAAGCTAATATGATTCACTCTTCTCCTCAGCAACATGTGCCTTTTCTTTCTTCTTCAGCCGAGGTCGTTTCGGTCGCCGTACCGCCGCCACCACCACCTCCGCCGCTACCTCCACCGTCCCATCAGGATGCTTCTTCCTCTTCCTCGTCGTTGTACAACCGGCCCGCGGCGGCTGCTGATTTTAGTACCATTTCAAGTGATGAAAATGTTACCTATTTTGTTAGTACTTCTACTGCTCATCAATTGAATTCTTAG | 732 | 48.63 | MIICDGVCRERFDEIAKKIKRETDVSSNIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRYKYREANMIHSSPQQHVPFLSSSAEVVSVAVPPPPPPPPLPPPSHQDASSSSSSLYNRPAAAADFSTISSDENVTYFVSTSTAHQLNS | 243 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 10860305 | 10861315 | + | Lag0041017.1 | Lac13g1221 | 592377 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac13g1221 | 243 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 51 | 184 | - | - | |
Lac13g1221 | 243 | Coils | Coil | 132 | 159 | - | - | |
Lac13g1221 | 243 | MobiDBLite | consensus disorder prediction | 184 | 200 | - | - | |
Lac13g1221 | 243 | ProSiteProfiles | LOB domain profile. | 52 | 153 | IPR004883 | - | |
Lac13g1221 | 243 | MobiDBLite | consensus disorder prediction | 183 | 212 | - | - | |
Lac13g1221 | 243 | Pfam | Lateral organ boundaries (LOB) domain | 53 | 150 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g1221 | Lac-Chr13:10860305 | Lac9g2273 | Lac-Chr9:42086121 | 2.20E-38 | dispersed | |
Lac13g1221 | Lac-Chr13:10860305 | Lac8g2852 | Lac-Chr8:45705239 | 4.60E-60 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
23200 | PF03195 | LOB | 8.30E-41 | No_clan | Lac | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac13g1221 | - | - | - | 0.0 |