Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac13g1335 | ATGTTCATTCCCGCCGCATTCAACGCCCTCAAATCCTCAAGGTCAATATCTTGGTTGCCGACGGGTAGGCTTCAGCAAACCTTGGCGGGATGTCTGGAGCTGAGTGGGATATCTCTGCACTCGGGGAAGGTTTCGAAAGTGAAGTTATGTCCGGAATTTGCAGGCAGAGGGAGGTATTTTGATTTTAGGTCCAACTTCATTCCTGTGTCGATTGATTATGCCGAGGAGTCGCCTCTGTGTACCACGCTCTCTAAGGATGGGTTTAAAGTTCGAACGGTTGAGCATTTGCTTTCTGCACTGGAGGCTATGGGGGTTGACAATTGCAGGATCGAGATAGAAAATGTAGATGCTAAAGATAGTGAAGTCGAGGTATTTCGTGACCAGGACCTTGAATTCATTTTTCTCATTGTTTGCGAAGGTCTAGTTTATGTCGTATTGATTACTCTGTACGCCTGA | 456 | 46.49 | MFIPAAFNALKSSRSISWLPTGRLQQTLAGCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFRSNFIPVSIDYAEESPLCTTLSKDGFKVRTVEHLLSALEAMGVDNCRIEIENVDAKDSEVEVFRDQDLEFIFLIVCEGLVYVVLITLYA | 151 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 12537293 | 12537936 | - | Lag0041131.1 | Lac13g1335 | 592491 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac13g1335 | 151 | PANTHER | UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED | 1 | 141 | IPR004463 | GO:0008759(InterPro)|GO:0009245(InterPro) | |
| Lac13g1335 | 151 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 24 | 141 | IPR020568 | - | |
| Lac13g1335 | 151 | Gene3D | lpxc deacetylase, domain 1 | 23 | 144 | IPR015870 | GO:0008759(InterPro)|GO:0009245(InterPro) | |
| Lac13g1335 | 151 | Pfam | UDP-3-O-acyl N-acetylglycosamine deacetylase | 25 | 115 | IPR004463 | GO:0008759(InterPro)|GO:0009245(InterPro) |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac13g1335 | K02535 | - | csv:101205101 | 229.18 |