Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g1359 ATGGCCGAACAGTCGTCGACTCTCTCCGGAAGCGTTGGTGCACCGAACAGTGAGAACGTGCTGCAGAAACACGTGGCGTTCTTCGACAGGAACCAGGACGGCGTCGTTTATCCCTGGGAAACCTTCAAGGGCTTCCGAGCAATTGGGGCCAATTTTCTTTTGTCCTCCGTCGCTGCTTTTTTCATTAACGTTGGACTCAGCTCAAAAACCCGACCGGGGAAATTTCCTAATTTTATGTTCCCAATTGAGATAAAGAACATTCAACTTGCCAAACATGGAAGTGATTCTGGTGTATATGATTCTGAGGGAAGGTTTGTTGCTTCAAAATTTGAAGAAATTTTCAAGAAACATGCACTGACCCATCATAATGCCTTGACAGAGAAAGAGCTTCAAGCTTTGCTCAAGGCAAATAGAGAGCCCAAAGACTATTCAGGATGGTTTGCTGCATGGACAGAATGGACAGTTCTATACAACCTTTGCAAAGATGAGAATGGTTTACTAAAAAAGGAAACTGTGAAGGCTGTTTATGATGGAAGCTTATTTGAACATATGGAGAAAGAGAGAGCATCAAAAAAGAAGAAATGA 585 43.08 MAEQSSTLSGSVGAPNSENVLQKHVAFFDRNQDGVVYPWETFKGFRAIGANFLLSSVAAFFINVGLSSKTRPGKFPNFMFPIEIKNIQLAKHGSDSGVYDSEGRFVASKFEEIFKKHALTHHNALTEKELQALLKANREPKDYSGWFAAWTEWTVLYNLCKDENGLLKKETVKAVYDGSLFEHMEKERASKKKK 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12958002 12963020 + Lag0041155.1 Lac13g1359 592515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g1359 194 PANTHER PEROXYGENASE 3-RELATED 15 192 IPR007736 GO:0004497(PANTHER)|GO:0005509(PANTHER)
Lac13g1359 194 Pfam Caleosin related protein 18 184 IPR007736 -
Lac13g1359 194 SUPERFAMILY EF-hand 19 137 IPR011992 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g2124 Lac-Chr12:38400761 Lac13g1359 Lac-Chr13:12958002 3.50E-44 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g1359 K17991 - csv:101213829 329.331