Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac13g1421 | ATGAAATCTCATCTCAAAAAGTTCAAGGAGAAAAAGAAGAATTCAAGACCATGCGAAGATTTTGAAATGAGCCACAATGGGACAGGATTTCTTCGAATTCGCCTGTTGCGAGGCAATAATCTCGCCATTCGCGATGCTCCCACCCGCAGCAGCGATCCCTACGTTGTCATCACCACCGCTCACCAGAAATTCAAATCTCGCGTGATGAAAAAGGACTGCAATCCAGTATGGAACGAGGAATTCACACTTTCGATTACCGATATCAACACACCAATCAAATTAGCAGTGTTCGACAAAGATAGGTTCACGAAAGACGACGGAATGGGGGATGCAGAGATCGACATAAATCCATACATAGAGTGTTTGAATATGGGATTAGAGAATCTGCCAAATGGGTGTGTGGTGAAAAGGATTCAACCAAGCAGATCAAACTGCCTTGCAGATGAGAGCTCCTGTGTTTGGAACGATGGCAAGATCACCCAAGACATGGCTCTCCGATTGCAGAATGTTGAATGTGGTGAAATCATGATTCAGATTCAGTTGTCCAATGTTTCTGCGATCAAAGGCCTAAGAACCTACTCTTTAGCCTGA | 591 | 44.16 | MKSHLKKFKEKKKNSRPCEDFEMSHNGTGFLRIRLLRGNNLAIRDAPTRSSDPYVVITTAHQKFKSRVMKKDCNPVWNEEFTLSITDINTPIKLAVFDKDRFTKDDGMGDAEIDINPYIECLNMGLENLPNGCVVKRIQPSRSNCLADESSCVWNDGKITQDMALRLQNVECGEIMIQIQLSNVSAIKGLRTYSLA | 196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 13855316 | 13856774 | - | Lag0041217.1 | Lac13g1421 | 592577 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac13g1421 | 196 | Pfam | C2 domain | 31 | 117 | IPR000008 | - | |
Lac13g1421 | 196 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 28 | 186 | IPR044562 | - | |
Lac13g1421 | 196 | Gene3D | C2 domain | 26 | 189 | IPR035892 | - | |
Lac13g1421 | 196 | SMART | C2_3c | 30 | 127 | IPR000008 | - | |
Lac13g1421 | 196 | ProSiteProfiles | C2 domain profile. | 11 | 131 | IPR000008 | - | |
Lac13g1421 | 196 | PRINTS | C2 domain signature | 92 | 100 | IPR000008 | - | |
Lac13g1421 | 196 | PRINTS | C2 domain signature | 71 | 84 | IPR000008 | - | |
Lac13g1421 | 196 | PRINTS | C2 domain signature | 47 | 59 | IPR000008 | - | |
Lac13g1421 | 196 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 26 | 125 | IPR035892 | - | |
Lac13g1421 | 196 | CDD | C2_ArfGAP | 29 | 173 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g1421 | Lac-Chr13:13855316 | Lac8g1626 | Lac-Chr8:34247575 | 5.90E-58 | dispersed | |
Lac13g1421 | Lac-Chr13:13855316 | Lac10g0291 | Lac-Chr10:2220391 | 1.80E-51 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac13g1421 | - | - | - | 0.0 |