Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g1465 ATGTTCTTTGGTTGTGTTCTAATAAATGAGCAAGCCATATATACAATGGGCTTTAGGGAAGTATGGGTGTTGTTGTCAATAATGCTTGCAACTTCAACTGCTGCTGTGGATCAACAAACCTACATTATTCACATGGACACCACAAAGATGGCCACCACCAACCCTGAACAATGGTACATGGACATGATTGATTCAGTCAATAAAATCTCATCTCTAGATGAAGAAGAAGCATCAAATGCTGCTGAGATTCTTTACGTCTACAAAACTGCTATTTCAGGTTTTGCTGCCAAGCTCTCCACTAGAAAGCTTCATTCTTTAAGCAAAATCCCTGGCTTTCTGGCTGCCACTCCTGATGAGCTACTACAGCTTCACACCACGCACTCCCCTCAGTTTCTTGGCCTACAAAGAGGCCATGGCCTTTGGAATTCTTCAAACTTGGCTTCTGATATAATTATTGGTGTGCTTGACACTGGCATTTGGCCTGAGCATATAAGTTTTCAGGACAAGGGTCTGCCCCCAGTGCCTAAAAAGTGGAAAGGCATTTGTCAAGCAGGCCCAAAATTCTCACGCTCAAATTGTAACAAAAAACTCGTTGGCGCAAGAGCCTACATTAAAGGCTACGAGACCATCGTCGGTAAACTGAACGCAACGGGGACGTTTCGGTCGCCTCGAGACTCAGATGGGCATGGCACACACACAGCATCGACTGCTGCTGGAAATATTGTGTACAGAGCAAGCCTTTATAACCAAGGCATGGGTGTAGCCACCGGAATGGGGTTCAATTCAAGAATTGCGGCATATAAAGTATGCTGGCAGGAGGGATGCGCCAACACCGATATTCTGGCAGCCATAGACCGTGCCGTTGCCGATGGAGTCGATGTTCTGTCACTCTCTTTGGGTGGCGGTGCCGGGTTTTTTGACAGAGATGGTATTGCCATAGCTGCATTTGGTGCAGTTCGAAATGGGGTCTTTGTGTCATGTTCAGCTGGTAATTCTGGCCCATATATCTCAACTGTTAGTAATGTTGCGCCATGGATCATGACAGTAGCTGCAAGCTACACTGATAGAACCTTCCCAGCCATTGTAAAGCTTGGAAATGGCAAAGTCTTTGAAGGCTCTTCTTTGTATTCTGGGAAGAACATAAATCAACTCCCACTTGTTTATAACAATACTGCAGGTGGACAAGAAGCAAATGTTTGTACAGCCGGTTCACTGGTTCCATCAAAGGTGAAGGGCAAAATTGTGGTATGTGAAAGAGGAACGAACTCGAGAACTGAAAAAGGAGAGCAAGTGAAATTAGCAGGAGGAGCTGGGATGATTGTGATCAACACAGAACTTGAAGGGGAGGAGCTTTTGGCTGACCTTCATGTCTTACCAGCCACTGCTCTTGGATTTTCAGCTGGCAAAGCCATCATAAACTACATAGCTTCCTCAAAACATCAACCAAGAGCTTCAATCACATTCGAAGGGACCAAATTTGGAAGTCAAGCACCGAGAGTCGCTGCATTTTCTTCTCGAGGGCCGACCCTCTTCAAACCGTACGTGATAAAGCCAGACATAACTGCACCTGGTGTTAATATATTAGCTGCTTGGCCACCCATTACGAGCCCAACTGAGCTCGAGTCCGATAAAAGAAGAGTGTTGTTCAATATCATTTCAGGAACTTCTATGTCTTGCCCTCACGTAAGCGGCTTAGCTGCACTGCTTAAATCCGCACACAAGGATTGGTCACCTGCTGCCATCAAATCTGCACTCATGACCACGGCTTACATTACTGACAACAAAATGAGTCTCATTCCCGATGCTGGCCGCGCTAGCGGTCGACCTGCGGACCCTTTTGCATATGGTTCGGGCCATGTCGATCCCGAGAAAGCGTCCGACCCGGGATTGATCTACGATATCGCGCCCCAAGACTACCTAAAGTACTTGTGTAGCTTGAACTACACTTCATCACAAGTTGCTTTAGTTTCAAGAGGGAATTTCGCTTGTCCATCCAAAAGAAAACTTCTTAAGCCAGGGGACTTGAACTACCCTTCTTTCTCTGTGCTCATGAAGAAGAAGGCCAAAAATGTTATTGTTACATTCAAGAGAACAGTGACAAATGTTGGTAGCCCAAGCAGTGATTACACTATTATAGTCAACAATCCAAAAGGAGTAAGAGTTATTGTGAAGCCTGAGATGTTGAGTTTTAGAAGATTGGGGCAGAAGTTGAGTTATCAAGTGAGTTTTGTTGCATTGGGAAAAGGAGAAGCTTTGAGTGACTTTTCTTTTGGATCTCTTATTTGGTTCTCAGGAAAATATGTTGTGAGAAGTCCTATAGCAGTGACCTGGCAAGAAGAAGAGGATAATCTAGAGAGTATTTCATTTTAG 2370 44.94 MFFGCVLINEQAIYTMGFREVWVLLSIMLATSTAAVDQQTYIIHMDTTKMATTNPEQWYMDMIDSVNKISSLDEEEASNAAEILYVYKTAISGFAAKLSTRKLHSLSKIPGFLAATPDELLQLHTTHSPQFLGLQRGHGLWNSSNLASDIIIGVLDTGIWPEHISFQDKGLPPVPKKWKGICQAGPKFSRSNCNKKLVGARAYIKGYETIVGKLNATGTFRSPRDSDGHGTHTASTAAGNIVYRASLYNQGMGVATGMGFNSRIAAYKVCWQEGCANTDILAAIDRAVADGVDVLSLSLGGGAGFFDRDGIAIAAFGAVRNGVFVSCSAGNSGPYISTVSNVAPWIMTVAASYTDRTFPAIVKLGNGKVFEGSSLYSGKNINQLPLVYNNTAGGQEANVCTAGSLVPSKVKGKIVVCERGTNSRTEKGEQVKLAGGAGMIVINTELEGEELLADLHVLPATALGFSAGKAIINYIASSKHQPRASITFEGTKFGSQAPRVAAFSSRGPTLFKPYVIKPDITAPGVNILAAWPPITSPTELESDKRRVLFNIISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYITDNKMSLIPDAGRASGRPADPFAYGSGHVDPEKASDPGLIYDIAPQDYLKYLCSLNYTSSQVALVSRGNFACPSKRKLLKPGDLNYPSFSVLMKKKAKNVIVTFKRTVTNVGSPSSDYTIIVNNPKGVRVIVKPEMLSFRRLGQKLSYQVSFVALGKGEALSDFSFGSLIWFSGKYVVRSPIAVTWQEEEDNLESISF 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14657577 14660728 - Lag0041261.1 Lac13g1465 592621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g1465 789 CDD PA_subtilisin_like 362 486 - -
Lac13g1465 789 ProSiteProfiles Serine proteases, subtilase domain profile. 131 626 - -
Lac13g1465 789 Pfam Subtilase family 148 618 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac13g1465 789 Gene3D Peptidase S8/S53 domain 149 639 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1465 789 FunFam subtilisin-like protease SBT1.5 355 493 - -
Lac13g1465 789 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Lac13g1465 789 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 773 IPR045051 -
Lac13g1465 789 CDD Peptidases_S8_3 121 590 IPR034197 -
Lac13g1465 789 FunFam Subtilisin-like protease SBT1.5 149 366 - -
Lac13g1465 789 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Lac13g1465 789 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
Lac13g1465 789 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Lac13g1465 789 SUPERFAMILY Subtilisin-like 123 630 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1465 789 SUPERFAMILY PA domain 395 483 IPR046450 -
Lac13g1465 789 Gene3D - 355 493 - -
Lac13g1465 789 FunFam Subtilisin-like protease SBT1.5 643 778 - -
Lac13g1465 789 Pfam PA domain 384 471 IPR003137 -
Lac13g1465 789 Pfam Peptidase inhibitor I9 40 124 IPR010259 -
Lac13g1465 789 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 124 IPR037045 -
Lac13g1465 789 Pfam Fibronectin type-III domain 674 775 IPR041469 -
Lac13g1465 789 Gene3D - 643 777 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2575 Lac-Chr11:41803308 Lac13g1465 Lac-Chr13:14657577 3.10E-187 dispersed
Lac13g1465 Lac-Chr13:14657577 Lac13g1471 Lac-Chr13:14765430 0.00E+00 dispersed
Lac13g1465 Lac-Chr13:14657577 Lac13g1466 Lac-Chr13:14680022 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g1465 - - - 0.0