Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g1466 ATGGGCTTTAGGGAAGTATGGGTGTTGTTGTCAATAATGCTTGCAACTTCAACTGCTGCTTTGGATCAACAGACCTACATTATTCACATGGACACCACAAAGATGGCCACCACCAACCCTGAACAATGGTACATGGACATGATTGATTCAGTCAATAAAATCTCATCTCTAGATGAAGAAGAAGCATCAAATGCTGAGATTCTTTACGTCTACAAAACTGCTATTTCAGGTTTTGCTGCCAAGCTCTCCACTAGAAAGCTTCATTCTTTAAGCAAAATCCCTGGCTTTCTGGCTGCCACTCCTGATGAGCTACTACAGCTTCACACCACGCACTCCCCTCAGTTTCTTGGCCTACAAAGAGGCCATGGCCTTTGGAATTCTTCAAACTTGGCTTCTGATATAATTATTGGTGTGCTTGATACTGGCATTTGGCCTGAGCATATAAGTTTTCGGGACAAGGGTCTGCCCCCAGTGCCTAAAAAGTGGAAAGGTATTTGTCAAGCAGGCCCAAAATTCTCACGTTCAAATTGTAACAAAAAACTTGTTGGCGCAAGAGCCTACATTAAAGGCTACGAGGCCATCGTCGGTAGATTGAACGCAACGGGGACGTATCGGTCGCCTCGAGACTCAGATGGACATGGCACACACACAGCATCAACTGCTGCCGGAAATATTGTGTACAAAGCAAGCCTTTATAACCAAGGCATGGGAGTAGCCACCGGAATGCGGTTCACTTCAAGGATTGCAGCATATAAAGTATGTTGGCCACAAGGGTGCGCGAATGCCGATATTTTGGCAGCCATAGACCGCGCTGTTGTCGATGGAGTCGATGTTCTGTCGCTCTCTTTGGGCGGCGGTGCCAGTGCTTTTTATAGAGATGATATTGCCATAGCTACATTTGGTGCTGTTCGAAATGGGGTCTTTGTCTCATGTTCAGCTGGTAATTCAGGCCCATTTACCTCAACTGTCGGTAATGTAGCGCCATGGATCATGACAATCGCTGCAAGCTACACTGATAGAGCCTTCCCAGCCATGGTAAAGCTGGGAAATGGCCAAGTTCTTGAAGGCTCTTCTTTGTATTCTGGGAAGAACATAAATCAACTCCCACTTGTTTATAACAATACTGCAGGTGGGCAAGAAGCAAATGTTTGTACAGCCGGTTCACTGGTTCCATCAAAGGTGAAGGGCAAAATTGTGGTATGTGAAAGAGGAACAAACTCGAGAACTGCAAAAGGAGAGCAAGTGAAATTAGCAGGAGGAGCTGGGATGATTCTGATCAACACACAACTTGAAGGGGAGGAGCTTTTTGCTGACCCTCATGTTTTACCAGCCACTACTCTTGGAGCTTCAGCTGGCAAAGCCATCATAAACTATATAGCTTCCTCGAAACATCAACCGAAAGCTTCGATCACATTCGAAGGAACCAAGTATGGAACTCGAGCACCGAGAGTGGCTGCGTTTTCTTCTCGAGGGCCGAGCATCGTCGGAGCGGACGTGATAAAGCCAGACATAACTGCACCTGGTGTTAATATATTAGCTGCTTGGCCACCCATTGTGAGCCCAAGTGAGCTTGAATCTGACAAAAGAAGAGTGTTGTTCAATATCGTTTCAGGAACTTCTATGTCTTGCCCTCATGTAAGCGGCTTAGCTGCGTTGCTTAAATCGGCGCACAAGGATTGGTCACCTGCTGCCATCAAATCTGCTCTCATGACCACAGCTTACACTAATGACAACAAAATGAGTCCCATTTCTGACGTTGGCTCTACGAACGGCAAGCCTGCAAACCCTTTTGCTTTCGGTTCTGGCCATGTCGATCCCGAGAAAGCTTCCGATCCAGGGCTCGTCTATGATATCACGCCCGAAGACTACCTAAACTACTTGTGTAGCTTGAACTATAATTCAACCCAAATTGCTTTAGTTTCAAGAGGGAATTTCACTTGTCCATCAAAAAGAAGATTTCTTCAGCCAGGGGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGAAGGCCAAAAATGATACTGTTACATTCAAGAGAACAGTGACAAATGTTGGTATCCCAAGGAGTGATTACACTGTTCAAATCAACAATCCTAAGGGAGTAACAATTATTGTGAAGCCAGAGAAGTTAAGTTTTAGGAGATTGGGAGAGAAGTTAGGTTACCAAGTGAGTTTTGTTGCATTGGGAAAAAGAGAAGCTTTGAGTGAATTTTGTTTTGGATCTCTGGTTTGGCTCTCAGGGAAATATGTTGTAAGAAGTCCTATAGCAGTCACTTGGCAGTAG 2289 45.13 MGFREVWVLLSIMLATSTAALDQQTYIIHMDTTKMATTNPEQWYMDMIDSVNKISSLDEEEASNAEILYVYKTAISGFAAKLSTRKLHSLSKIPGFLAATPDELLQLHTTHSPQFLGLQRGHGLWNSSNLASDIIIGVLDTGIWPEHISFRDKGLPPVPKKWKGICQAGPKFSRSNCNKKLVGARAYIKGYEAIVGRLNATGTYRSPRDSDGHGTHTASTAAGNIVYKASLYNQGMGVATGMRFTSRIAAYKVCWPQGCANADILAAIDRAVVDGVDVLSLSLGGGASAFYRDDIAIATFGAVRNGVFVSCSAGNSGPFTSTVGNVAPWIMTIAASYTDRAFPAMVKLGNGQVLEGSSLYSGKNINQLPLVYNNTAGGQEANVCTAGSLVPSKVKGKIVVCERGTNSRTAKGEQVKLAGGAGMILINTQLEGEELFADPHVLPATTLGASAGKAIINYIASSKHQPKASITFEGTKYGTRAPRVAAFSSRGPSIVGADVIKPDITAPGVNILAAWPPIVSPSELESDKRRVLFNIVSGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYTNDNKMSPISDVGSTNGKPANPFAFGSGHVDPEKASDPGLVYDITPEDYLNYLCSLNYNSTQIALVSRGNFTCPSKRRFLQPGDLNYPSFSVFMKKKAKNDTVTFKRTVTNVGIPRSDYTVQINNPKGVTIIVKPEKLSFRRLGEKLGYQVSFVALGKREALSEFCFGSLVWLSGKYVVRSPIAVTWQ 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14680022 14683233 - Lag0041262.1 Lac13g1466 592622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g1466 762 CDD PA_subtilisin_like 346 470 - -
Lac13g1466 762 Gene3D Peptidase S8/S53 domain 133 623 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1466 762 SUPERFAMILY PA domain 389 464 IPR046450 -
Lac13g1466 762 CDD Peptidases_S8_3 105 574 IPR034197 -
Lac13g1466 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Lac13g1466 762 ProSiteProfiles Serine proteases, subtilase domain profile. 115 610 - -
Lac13g1466 762 Pfam Peptidase inhibitor I9 25 108 IPR010259 -
Lac13g1466 762 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Lac13g1466 762 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Lac13g1466 762 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Lac13g1466 762 FunFam subtilisin-like protease SBT1.5 339 477 - -
Lac13g1466 762 FunFam Subtilisin-like protease SBT1.5 627 762 - -
Lac13g1466 762 Gene3D - 339 477 - -
Lac13g1466 762 Gene3D - 627 761 - -
Lac13g1466 762 Pfam Fibronectin type-III domain 658 759 IPR041469 -
Lac13g1466 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 11 108 IPR037045 -
Lac13g1466 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 757 IPR045051 -
Lac13g1466 762 Pfam Subtilase family 132 602 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac13g1466 762 FunFam Subtilisin-like protease SBT1.5 133 350 - -
Lac13g1466 762 Pfam PA domain 368 455 IPR003137 -
Lac13g1466 762 SUPERFAMILY Subtilisin-like 107 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1466 Lac-Chr13:14680022 Lac1g2631 Lac-Chr1:47657902 4.00E-203 dispersed
Lac13g1466 Lac-Chr13:14680022 Lac13g1471 Lac-Chr13:14765430 0.00E+00 proximal
Lac13g1465 Lac-Chr13:14657577 Lac13g1466 Lac-Chr13:14680022 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g1466 - - - 0.0