Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g1471 ATGGCCTTTAGAGAAGTGTGGGTATTGTTGTGTATAGTGTTTGCTGCTTCAACTGCTGCTTTGGATCAACAAACTTACATAATTCACATGGACACCACGAAGATGCCCACCACCAACCCTCAACAATGGTACACATCCATGATTGATTCAGTCAATGAACTCGCATCTCTCGACGAGGACGAAGAAGAAGTATCGAATGCTGCCGAGATTTTCTACGTCTACAAAAATGCCATTTCAGGCAAGGAACTCAAATGTGTGCTTGACAAATATAAAAACAATGGCTTTGCTGCAAAGCTCTCAACCAAAAAGCTAAACTCTCTAAGCCAAACCCCGGGTTTCCTCACGGCCATTCCCGACCAACTACTACAACTCCACACCACACACTCCCCTCACTTCCTCGGCCTCAAAACAGGGCACGGCCTCTGGAACGCCACGAACTTGGCTTCGGATGTGATCGTTGGCGTAGTCGACACCGGCATTTGGCCGGAGCACGTAAGTTTTGAGGACAAGGGGCTGCCCCCAGTGCCAAGAAGATGGAAAGGGGGTTGTGAAGAGGGCCAGAAATTCTCAGCTTCAAATTGTAATAGAAAACTGATTGGCGCAAGAGCCTTCATTAAGGCCTATGAGGCCAGTTTTGGTAGGCTGAATGAAAGTGGAGTGTTTCGGTCGCCTCGAGACTGGAATGGACATGGCACTCACACGGCTTCCACTGCTGCTGGAAATCTCGTGTTCAAAGCTGGTTTTTATAATCATGCCTTGGGAAATGCTGCTGGAATCAGGTTCACTTCAAGAATCGCAGCGTACAAAGTGTGCTGGCCACTAGGCTGCGCGATCGCCGACGTCCTAGCAGCGATGGACCGTGCTGTCGCCGACGGAGTCGACGTTCTGTCGCTGTCTTTGGGTGGTAATCCAGTTCCTTTTTACAATGACGGCCTAGCCATAGCTGCATTTGGTGCAACACAGAAAGGAGTTTTTGTGTCCTGTGCGGCGGGTAATTCTGGCCCAGCTCCCTCAACGGCTGGTAATTTAGCACCATGGATCATGACAGTGGGTGCGAGCTACACTGATAGAATCTTCCCAACCACTGTAAAGCTTGGAAATGGACAAGTTTTTGAAGGCTCTTCTTTGTTTTCTGGGAACAACATGGGTCAACTCCCACTCGTCTATAAACAAGGTCGACAAGGAGCAAACCTTTGCCTGGCTGGCTCACTTGTCCCATCAATGGTGAGGGGAAAAATTGTGATATGTGAACGAGGAACAAACACAAGAATTGGAAAAGGAGAGCAAGTGAAATTAGCTGGAGGAGCTGGAATGATTCTGATCAACACACAACTCGAAGGGGAGGAGCTTTTTGCCGACCCTCATGTTTTACCAGCCACTTCTCTTGGAGCTGCAGCCGGCAAGGCCATAAAAAACTACATAGCTTCCTCAAAACAACCAAAAGCTTCAATCGCATTCCAAGGAACCAAATATGGAAGCCGAGCGCCAAGAGTAGCTGCATTTTCTTCTCGAGGGCCGAGCTCTATCGAACCCAATATTATCAAACCAGACATAATTGCACCCGGAGTCAATATCTTGGCTGCTTGGCCATCCATTGTGAGCCCAAGTGAGCTCGAGTTTGATAAAAGAAGAGTATTGTTCAACATCGTTTCAGGAACTTCTATGTCTTGCCCTCATGTTAGCGGCTTAGCCGCGCTACTTAAAGCAGCACACAAGGATTGGTCACCTGCTGCCATCAAATCTGCTCTCATGACCACAGCTTACACTAATGACAACAAAATGAGTCCCATTTCTGATGTCGGCTCTGCAAACGGCAAGCCTGCAAACCCTTTTGCTTTCGGTTCTGGCCATGTCGATCCCGAGAAAGCTTCCGATCCGGGGCTCGTCTATGATATCACACCCGAAGACTACCTAAACTACTTGTGTAGCTTGAACTATAATTCAACACAAATTGCTTTAGTTTCAAGAGGGAGTTTCACTTGTCCATCAAAAAGAACATTTCTTCAGCCAGGGGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGAAGGCCAAAAATGTTACTGTTACATTGAAGAGAACAGTGACAAATGTTGGTAGCCCAATGAGTGATTACACTGTTCAAATCAACAATCCAAAAGGAATAAAAATTAGTGTGAAGCCTGAGAAGCTAAGTTTTGGGAGATTGGGAGAGAAGTTAAGTTACAGAGTAAGTTTTGTTGCATTTGGAAAAGAAGAAGCTTTGAGTGAATTTTCTTTTGGATCTCTTGTTTGGCTCTCAGGAAAATATGTTGTAAAAAGTCCTATAGCAGTGACTTGGCAATAG 2331 46.33 MAFREVWVLLCIVFAASTAALDQQTYIIHMDTTKMPTTNPQQWYTSMIDSVNELASLDEDEEEVSNAAEIFYVYKNAISGKELKCVLDKYKNNGFAAKLSTKKLNSLSQTPGFLTAIPDQLLQLHTTHSPHFLGLKTGHGLWNATNLASDVIVGVVDTGIWPEHVSFEDKGLPPVPRRWKGGCEEGQKFSASNCNRKLIGARAFIKAYEASFGRLNESGVFRSPRDWNGHGTHTASTAAGNLVFKAGFYNHALGNAAGIRFTSRIAAYKVCWPLGCAIADVLAAMDRAVADGVDVLSLSLGGNPVPFYNDGLAIAAFGATQKGVFVSCAAGNSGPAPSTAGNLAPWIMTVGASYTDRIFPTTVKLGNGQVFEGSSLFSGNNMGQLPLVYKQGRQGANLCLAGSLVPSMVRGKIVICERGTNTRIGKGEQVKLAGGAGMILINTQLEGEELFADPHVLPATSLGAAAGKAIKNYIASSKQPKASIAFQGTKYGSRAPRVAAFSSRGPSSIEPNIIKPDIIAPGVNILAAWPSIVSPSELEFDKRRVLFNIVSGTSMSCPHVSGLAALLKAAHKDWSPAAIKSALMTTAYTNDNKMSPISDVGSANGKPANPFAFGSGHVDPEKASDPGLVYDITPEDYLNYLCSLNYNSTQIALVSRGSFTCPSKRTFLQPGDLNYPSFSVFMKKKAKNVTVTLKRTVTNVGSPMSDYTVQINNPKGIKISVKPEKLSFGRLGEKLSYRVSFVAFGKEEALSEFSFGSLVWLSGKYVVKSPIAVTWQ 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14765430 14770923 - Lag0041267.1 Lac13g1471 592627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g1471 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Lac13g1471 776 FunFam Subtilisin-like protease SBT1.5 150 367 - -
Lac13g1471 776 Pfam Fibronectin type-III domain 672 773 IPR041469 -
Lac13g1471 776 FunFam Subtilisin-like protease SBT1.5 641 776 - -
Lac13g1471 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 125 IPR037045 -
Lac13g1471 776 Pfam Subtilase family 149 616 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac13g1471 776 Pfam PA domain 385 470 IPR003137 -
Lac13g1471 776 FunFam subtilisin-like protease SBT1.5 356 491 - -
Lac13g1471 776 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Lac13g1471 776 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Lac13g1471 776 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Lac13g1471 776 SUPERFAMILY Subtilisin-like 124 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1471 776 Gene3D - 356 491 - -
Lac13g1471 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 771 IPR045051 -
Lac13g1471 776 ProSiteProfiles Serine proteases, subtilase domain profile. 132 624 - -
Lac13g1471 776 Pfam Peptidase inhibitor I9 25 125 IPR010259 -
Lac13g1471 776 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 153 164 IPR023827 -
Lac13g1471 776 Gene3D Peptidase S8/S53 domain 150 637 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1471 776 Gene3D - 641 775 - -
Lac13g1471 776 CDD Peptidases_S8_3 122 588 IPR034197 -
Lac13g1471 776 CDD PA_subtilisin_like 362 484 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1465 Lac-Chr13:14657577 Lac13g1471 Lac-Chr13:14765430 0.00E+00 dispersed
Lac13g1471 Lac-Chr13:14765430 Lac4g3028 Lac-Chr4:48453912 5.60E-200 dispersed
Lac13g1466 Lac-Chr13:14680022 Lac13g1471 Lac-Chr13:14765430 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g1471 - - - 0.0