Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac13g1478 | ATGCAAACTCATCGGAGCAAGATATTTCAAGCTCGACGGCAGCCCCGATCCCTCGACATCTTGTCTCCGGTAGACATCAGTGGCCACGGCACGCACACATCGTCAATCGCCACGGGCAATGCAGTTCCCGGAGCCAGCCTCTCCGGTCTGGCCGCAGGAACAGCCCGTGGCGGTGTGCCGTCGGCGAGAGTGGCCATGTACAAGGTCTGCTGGTCGGGCACCGGGTGCTCCGATATGGATCTTCTGGCCGCCTTCGACGCCGCCATACAGGACGGTGTAGACGTCATTTCGATATCGATCGCCGGGAACGGCTTCGGCAACTACACCGAGGACGCAGTCGCCATCGGCGCGTTTCATGCCATGAAGAAGGGCATCATCACGGTGACCGCTGCGGGCAACACCGGTCCGACCGCCGGCAGCGTGGTGAACCACGCGCCGTGGATTTTGACGGTTGCTGCGAGCGGTATCGACCGGAAATTTGTGAGCCCGTTTGAGTTGGGCAATGGGAAGAACATCTCAGGAGTGGGAATAAACCTTTTCAATCCAAATCAAAAGATGTATCCATTGGTGAGCGGAGGGGATGTGGCGATGAACCCACAGAGCAAAGACAGTGCAAGCTTTTGCGTTGATGGCACACTTGATCCAAGCAAGGTCAAAGGCAAGCTTGTGTTCTGCAAATTGATCACTTGGGGCGCTGATTCTGTTGTCAAATCTATTGGTGCTTATGGCACTATCATTCAAAGTGATCAGTTTCTTCCTAACACTGATCTCTTCATGGCCCCTGCCTCCCTTGTTAGTAGCTTGGTTGGTGAGACTATCGACAACTACATCCACTCCACAAGAGCACCAACGGCTGTGATATACAAATCAAGACAACTGAAGTCAGCAGCTCCAATCGTGGCTTTCTTCTCTTCCAGAGGTCCAAATCCAGGTTCCAACCGCATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGACATATTGGCAGGGTACACGCCACTTAAGTCACTGACGGGGCTGAAGGGTGATACTCAATTCTCCAAATTCACGCTCATGTCTGGCACTTCCATGGCCTGCCCTCACGTCGCCGCCGCCGCTGCCTATGTCAAGTCTTTCCACCCTCTTTGGTCTCCTGCTGCCATTAGATCTGCTCTCTTGACCACTGCGAGCCCGGTCAGCCGACGACTGAACCCCGACGGAGAATTTTCATATGGTGCTGGCAACCTAAGTCCATCAAGAGCAAGAAACCCTGGCCTAATCTACGACCTCAACGAAATGTCATACATCCAATTCCTTTGCAGTGAAGGCTACACCGGATCTTCAATTTCCATCCTCACCGGGACCAAATCCATAGACTGCTCCACTCTCCGTGGCCAAGGGTACGACTCTCTCAATTACCCTACCTTTCAACTCAGCCTCAAACCCACCCGACAGCCGACGACCGCCGTGTTCTGGCGGCAAGTCACGAACGTTGGCCGCCCCGTCTCCGTCTACAACGCCACCGTGAGGGCTCCCCCCGGGGTGGAGATCACAGTGGTTCCAGCAACCCTGTCGTTCTCACAGTTGCTGCAGAAGCAAAACTTCAAGGTCATTGTGAAGGCCAGTCCTTTGCCGTCCGCGAAAATGGTGTCGGGCTCGCTTACTTGGGCTGCTGCTCGATATGTTGTGAGAAGTCCCATTGTCATTTATGGCTCGTGA | 1698 | 54.59 | MQTHRSKIFQARRQPRSLDILSPVDISGHGTHTSSIATGNAVPGASLSGLAAGTARGGVPSARVAMYKVCWSGTGCSDMDLLAAFDAAIQDGVDVISISIAGNGFGNYTEDAVAIGAFHAMKKGIITVTAAGNTGPTAGSVVNHAPWILTVAASGIDRKFVSPFELGNGKNISGVGINLFNPNQKMYPLVSGGDVAMNPQSKDSASFCVDGTLDPSKVKGKLVFCKLITWGADSVVKSIGAYGTIIQSDQFLPNTDLFMAPASLVSSLVGETIDNYIHSTRAPTAVIYKSRQLKSAAPIVAFFSSRGPNPGSNRILKPDIAAPGVDILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTASPVSRRLNPDGEFSYGAGNLSPSRARNPGLIYDLNEMSYIQFLCSEGYTGSSISILTGTKSIDCSTLRGQGYDSLNYPTFQLSLKPTRQPTTAVFWRQVTNVGRPVSVYNATVRAPPGVEITVVPATLSFSQLLQKQNFKVIVKASPLPSAKMVSGSLTWAAARYVVRSPIVIYGS | 565 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 14820927 | 14824733 | - | Lag0041274.1 | Lac13g1478 | 592634 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac13g1478 | 565 | Gene3D | - | 157 | 293 | - | - | |
Lac13g1478 | 565 | CDD | PA_subtilisin_like | 166 | 287 | - | - | |
Lac13g1478 | 565 | Gene3D | Peptidase S8/S53 domain | 11 | 428 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac13g1478 | 565 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 10 | 561 | IPR045051 | - | |
Lac13g1478 | 565 | Pfam | Fibronectin type-III domain | 464 | 562 | IPR041469 | - | |
Lac13g1478 | 565 | Gene3D | - | 432 | 564 | - | - | |
Lac13g1478 | 565 | SUPERFAMILY | Subtilisin-like | 19 | 416 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac13g1478 | 565 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 354 | 364 | IPR023828 | - | |
Lac13g1478 | 565 | PRINTS | Subtilisin serine protease family (S8) signature | 353 | 369 | IPR015500 | - | |
Lac13g1478 | 565 | PRINTS | Subtilisin serine protease family (S8) signature | 25 | 38 | IPR015500 | - | |
Lac13g1478 | 565 | Pfam | Subtilase family | 24 | 405 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lac13g1478 | 565 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 415 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g1478 | Lac-Chr13:14820927 | Lac1g2253 | Lac-Chr1:43976070 | 7.20E-149 | dispersed | |
Lac13g1478 | Lac-Chr13:14820927 | Lac13g1480 | Lac-Chr13:14863282 | 4.70E-233 | proximal | |
Lac10g1389 | Lac-Chr10:12939452 | Lac13g1478 | Lac-Chr13:14820927 | 1.30E-52 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac13g1478 | - | - | - | 0.0 |