Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g1480 ATGTCGATATCGAAATCTTCTCGTCTTCTCGTCTTCGTTCTTTTCTTCGTCGTAGCATTCGTTGCTGCCGTAGAAATCGATGAGAAAAAGAAACATTTCATTGTTTTTCTGGAGAATAAACCTGTTTTAAATGAAGTTGATGCAGTAGAAACACATCTTAATGTTCTCAAGTCAGTGAAGGAAAGTCATGTCGAGGCAAAGGAGTCGATGGTGTATAGTTACACAAAAAGCTTCAATGCCTTTGCTGCCAAGCTTACTGAAGAGGAAGCCAAAACATTGTCAAAGAGGGAAGATGTGCACAATGTGATCCCAAACAAGTATAGAAAGCTACAAACAACAAGATCATGGGACTTCATTGGACTTCCTATTAATGCAAGAAGAAATACCAAACAAGAGAGTGATATTGTTGTGGGTTTATTTGATACTGGGATCACCCCAACGGCTGAGAGCTTTAAAGATGATGGATTTGGTCCTCCACCCAAAAAATGGAAAGGCAGCTGTCACCACTTTGCCAATTTCACTGGCTGCAACAACAAGCTCATCGGAGCAAGATATTTCAAGCTCGACGGCAGCTCCGATCCCACCGACATCTTGTCGCCGATAGACGTCGATGGCCACGGCACGCACACGTCCTCAACGGCAACGGGCAATGCAATTGCCGGAGCCAGTCTCTCCGATCTGGCCAAAGGAACCGCCCGTGGCGGCGTGCCATCGGCGAGAGTTGCCATGTACAAGGTCTGCTGGGAAAGCACGGGGTGCGCCGATATGGATATTCTGGCCGCCTTCGACGCTGCCATACATGACGGGGTCGATGTCATTTCGATATCGATCGGCGGAGGCGGCTTTGGCAATTACTCCGACGACTCGATTTCTATCGGCGCATTTCATGCCATGAAGAAGGGCATCATCACCGTGACCTCCGCCGGCAACAGCGGTCCCGTTGCCGGCAGCATTGTCAACCACGCGCCGTGGATTGTGACCGTTGCTGCCAGTGCTATTGATCGGAAATTTGTCAGCCCATTGGAGTTGGGCAATGGGAACAACATCTCAGGAGTAGCGATAAACACGTTCAATCCAAAGGAAAAAATGTACCCATTGGTGAGCGGACGGGACGTGGCGAGGAACTCGGAGAGCAAAGAGAGTGCAAGCTACTGCGCTGAGGAGTCACTTGATCCAAACAAGGTGAAAGGGAACCTTGTGTTGTGCAAATTCATGAGTTGGGGCACTGATTCTGTTGTGAAATCACTTGGTGGTAGTGGCGTTATCATTCAAAGTGACCAGTTTCTTGACAATGCCGATATCTTCATGGCCCCTGCCACTGTCGTTAGTAGCTTGGTTGGTGATACTATTGCCAACTACATCAAATCCACAAAAACTCCAAAGGCAGTGATATACAGAACAAGACAATTCAAAGCAACAGCTCCAATGGTGGCTTCCTTCTCATCCAGAGGCCCAAATCCAGGTTCCAACCGTATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGACATATTGGCAGGGTATACGCCGCTGAAGTCACTGACGGGGCTGAAGGGTGACACTCAATTCTCCAAATTTACGCTCAGTCTGGCACTTCCATGGCCTGCCCTCACGTCGCCGCCGCCGCCGCCTATGTCAAGTCTTTCCACCCCCACTGCGAGACCAATCAGCCGACGATTGAATCCCGACGGCGAATTCGCATATGGCGCTGGCAACCTAAATCCATCCCGAGCCAAAAATCCCGGCCTAATCTACGACCTCAACGAAATGTCTTACATCCAATTCCTTTGTCGCGAAGGCTACACGGGCTCTTCAATCGCTGTCCTCGCCGGAACCAAATCTATAAACTGCTCTACTCTAATCCCTGGTCTAGGCCACGACTCTCTCAACTACCCAACCATTCAACTCAGTCTAAAAAGCACCCAACGTCCGATGACCACCGTGTTTCGACGTCGAGTCACCAACGTCGGTCGTGCCGTCTCTGTCTATAATGCCACCGTCCGAGCTCCCGCTGGGGTGGAGATCACGGTGGTACCGACGACTCTATCATTCTCACGGTTGTTGCAAAAGCGAAGCTTTAAGATTGTTGTGAAGGCCAGTCCTTTGCCATCGACAAAAATGGTGTCGGGTTCGCTTGCTTGGGTTGGGGCTCGACATGTTGTGAGAAGTCCTATTGTTGTTTATAGCCCCTGA 2193 49.89 MSISKSSRLLVFVLFFVVAFVAAVEIDEKKKHFIVFLENKPVLNEVDAVETHLNVLKSVKESHVEAKESMVYSYTKSFNAFAAKLTEEEAKTLSKREDVHNVIPNKYRKLQTTRSWDFIGLPINARRNTKQESDIVVGLFDTGITPTAESFKDDGFGPPPKKWKGSCHHFANFTGCNNKLIGARYFKLDGSSDPTDILSPIDVDGHGTHTSSTATGNAIAGASLSDLAKGTARGGVPSARVAMYKVCWESTGCADMDILAAFDAAIHDGVDVISISIGGGGFGNYSDDSISIGAFHAMKKGIITVTSAGNSGPVAGSIVNHAPWIVTVAASAIDRKFVSPLELGNGNNISGVAINTFNPKEKMYPLVSGRDVARNSESKESASYCAEESLDPNKVKGNLVLCKFMSWGTDSVVKSLGGSGVIIQSDQFLDNADIFMAPATVVSSLVGDTIANYIKSTKTPKAVIYRTRQFKATAPMVASFSSRGPNPGSNRILKPDIAAPGVDILAGYTPLKSLTGLKGDTQFSKFTLSLALPWPALTSPPPPPMSSLSTPTARPISRRLNPDGEFAYGAGNLNPSRAKNPGLIYDLNEMSYIQFLCREGYTGSSIAVLAGTKSINCSTLIPGLGHDSLNYPTIQLSLKSTQRPMTTVFRRRVTNVGRAVSVYNATVRAPAGVEITVVPTTLSFSRLLQKRSFKIVVKASPLPSTKMVSGSLAWVGARHVVRSPIVVYSP 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14863282 14874961 - Lag0041276.1 Lac13g1480 592636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g1480 730 Gene3D - 596 729 - -
Lac13g1480 730 Gene3D - 334 470 - -
Lac13g1480 730 ProSiteProfiles Serine proteases, subtilase domain profile. 115 579 - -
Lac13g1480 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 111 IPR037045 -
Lac13g1480 730 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
Lac13g1480 730 CDD PA_subtilisin_like 341 464 - -
Lac13g1480 730 Gene3D Peptidase S8/S53 domain 134 523 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1480 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 57 726 IPR045051 -
Lac13g1480 730 Pfam Fibronectin type-III domain 629 727 IPR041469 -
Lac13g1480 730 Gene3D Peptidase S8/S53 domain 551 592 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1480 730 SUPERFAMILY Subtilisin-like 110 583 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac13g1480 730 Pfam Subtilase family 133 505 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1480 Lac-Chr13:14863282 Lac1g2253 Lac-Chr1:43976070 1.10E-173 dispersed
Lac13g1478 Lac-Chr13:14820927 Lac13g1480 Lac-Chr13:14863282 4.70E-233 proximal
Lac13g1479 Lac-Chr13:14825747 Lac13g1480 Lac-Chr13:14863282 7.00E-82 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g1480 - - - 0.0