Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g1491 ATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTCTAAACCAGAAACAAGCAGACATCTATTCTCAGAGTGCAATCTAACTAAAGGTTTGAGGAAAATTTTCTTTACCCCTGCTAATGAATGGTTTGTTGATGATAGGAATGGTTGGGCTATCCCTGATTATTGCGAGCGGCTGTGGAGAAATAGTAGTGGAAGCATTGATGGGATGAACATTCAGAGAAGGGAAGAAGAGTCATACTTGTCGGTGATTCAACCCACAAATACTCGAGGAGAAAGGGATGCGATCATGAGTAGGGACCTTCATCGTTGGTGTCCAATTTATGATGGCATCTGGAAATTAAATTGTGACGCTTCATGGAACGAGAGGAAGAGAAGAGGAGGGATCGACAGGATTCTTCGATGTTCGGACGGTTCTCCAGTGACAACGGGATTTCGTTTGATTCTTGAGCTGGATTCCCTTCAAGTGGTAAACCTGCTCTCAAGAGAGGATGACGACAATACAGACATGGGTATGTTTGTGAACGAGGCGTTGCATGTGCTATCCAACGTGAAGATTGAAGCAATTCTTCATACTCCAAGACGGCTGTCAAGCTTCTCCAGAGGAATAATCTCCATCACAGACACGCCTCTGTGGACCCTCACAAGAGTTATAATTGGGTCAATTTTGACGTTTCTGCTATGCTTGTATGATGATCTCTGGGAGAATTTGATTGGAAAGGCGTTTTTTGCTGAATTCTCTTGGGGTCTGATTGCCAATATGGTTGACAAGGAATTTTTTACCGAGTATGGTGAAGCTACTCAATATGAAATTGAAGAAGTAGTTGGTAAAGGAAGCTATGGGGTTGTTGCATCTGCCATAGATACTCACTCTGGTGAGAGAGTTGCCATCAAGAAGATAAATAATGTCTTCGAGCATGTTTCTGATGCCACACGGATTCTAAGAGAAATTAAGCTCCTCCGGTTTCTCCATCATCCTGATATTGTTGATATAAAACATATAATGCTCCCTCCATCCAGAAGGGAGTTCAAAGATCTGTACGTTGTTTTTGAGTTGATGGAGTCTGACCTTCATCATGTACTCAAGGCTAATGATGATCTCACCCCTCAACATCATCAATTTTTCTTGTATCAACTCCTAAGAGCCTTGAAGTATATCCATTCAGCACATGTGTTCCATAGAGATTTGAAGCCGAAGAATATACTTGCCAATGCAGACTGCAAACTGAAGATCTGTGACTTTGGACTTGCTCGTGCATCTTTTACTGATGCACCGTCTGCTATTTTTTGGACTGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATCTTTGCTGAAATGTTGGCAGGCAAGCCGCTGTTTCCTGGGAAAAGTGTTGTCCATGAGCTGGATCTAATGACTGACTTACTTGGTACTCCTTCGGCTGAATGTATTGCTAAGATTCGTAATGAAAAGGCTAAAAGATATTTGAATAGCATGAAAAAAAAGCCTCCAGTTCCTCTGTCAAGAAAGTTCCCTAATGCAGATCCACTTGCTCTTCGTTTACTTGAGCGTCTGCTTGCATTTGATCCTGACGATCGTCCTTCTGCAGAGGAGGCTTTAGCTCATCCATATTTCTATGGACTGGCAAATTTGGAGGATGAACCATCCAGGCAACCCATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGAAAGTTGACTAAAGATGATGTTAGAGAGCTTATTTATAGAGAAATTTTGGAGTATCATCCTCAAATGCTACAGGAGTACCTTCAAGGTTCTGAGAGTCACTTCTTGTATCCCAGCGGAATTGATCGATTCAAGCGTCAATTTGATCATCTTGAGGAACGTTCTGGTAAAGGTGAGAGGGGCAGTCCACTTCTAAGGAAGCATGCCTCCTTGCCTAGGGAGCGAATATATACACCAAGAGATGAAGATGATGATGAAAATTGTAAAACAGAACAGCGAAATGCAGCTTCAGCTGAAAATACAACACCTCAAAGTCCTCCTGGACCTGGTTATTCATTAACTGCTCAGAATGGTTCTGTTCATGCAGACTGCAGTAGTTATAACCTGCTGAAGAGTGCAAGTATAAATTTTTCAAAATGGGTGGATTAA 2178 42.06 MTLRLLEAGDWSKPETSRHLFSECNLTKGLRKIFFTPANEWFVDDRNGWAIPDYCERLWRNSSGSIDGMNIQRREEESYLSVIQPTNTRGERDAIMSRDLHRWCPIYDGIWKLNCDASWNERKRRGGIDRILRCSDGSPVTTGFRLILELDSLQVVNLLSREDDDNTDMGMFVNEALHVLSNVKIEAILHTPRRLSSFSRGIISITDTPLWTLTRVIIGSILTFLLCLYDDLWENLIGKAFFAEFSWGLIANMVDKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGERVAIKKINNVFEHVSDATRILREIKLLRFLHHPDIVDIKHIMLPPSRREFKDLYVVFELMESDLHHVLKANDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFTDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLAGKPLFPGKSVVHELDLMTDLLGTPSAECIAKIRNEKAKRYLNSMKKKPPVPLSRKFPNADPLALRLLERLLAFDPDDRPSAEEALAHPYFYGLANLEDEPSRQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGSESHFLYPSGIDRFKRQFDHLEERSGKGERGSPLLRKHASLPRERIYTPRDEDDDENCKTEQRNAASAENTTPQSPPGPGYSLTAQNGSVHADCSSYNLLKSASINFSKWVD 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15018366 15026045 - Lag0041287.1 Lac13g1491 592647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g1491 725 Gene3D Phosphorylase Kinase; domain 1 284 605 - -
Lac13g1491 725 ProSitePatterns Protein kinases ATP-binding region signature. 274 298 IPR017441 GO:0005524(InterPro)
Lac13g1491 725 MobiDBLite consensus disorder prediction 676 700 - -
Lac13g1491 725 FunFam Mitogen-activated protein kinase 354 582 - -
Lac13g1491 725 FunFam Mitogen-activated protein kinase 255 360 - -
Lac13g1491 725 SMART serkin_6 268 559 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac13g1491 725 FunFam Mitogen-activated protein kinase 583 605 - -
Lac13g1491 725 MobiDBLite consensus disorder prediction 636 700 - -
Lac13g1491 725 Gene3D Transferase(Phosphotransferase) domain 1 354 582 - -
Lac13g1491 725 MobiDBLite consensus disorder prediction 636 675 - -
Lac13g1491 725 ProSitePatterns MAP kinase signature. 303 406 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac13g1491 725 SUPERFAMILY Protein kinase-like (PK-like) 265 564 IPR011009 -
Lac13g1491 725 ProSiteProfiles Protein kinase domain profile. 268 559 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac13g1491 725 CDD STKc_TDY_MAPK 267 604 - -
Lac13g1491 725 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 265 600 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Lac13g1491 725 Pfam Protein kinase domain 268 559 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1491 Lac-Chr13:15018366 Lac9g2254 Lac-Chr9:41888913 5.00E-187 dispersed
Lac3g0430 Lac-Chr3:3293053 Lac13g1491 Lac-Chr13:15018366 5.30E-212 transposed
Lac9g2984 Lac-Chr9:47536226 Lac13g1491 Lac-Chr13:15018366 6.30E-18 transposed
Lac13g1491 Lac-Chr13:15018366 Lac7g2604 Lac-Chr7:44458702 5.70E-90 wgd
Lac13g1491 Lac-Chr13:15018366 Lac8g0263 Lac-Chr8:2984738 9.60E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85868 PF00069 Pkinase 4.60E-67 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g1491 - - - 0.0