Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g0981 ATGTTGAATTGTACTCTTCATCAGAATCTGATCGGAGATCGCGATTTGCTGCAGCCATTAATGTGGTCAAAGTCCGATAAAAAACCCGACGGATCTGAGATGTTTAACAACACATCAAAAGGGGAAAACGATTCTCACGGAGGAATGAACGCTAACGCACCAAATGTCGTCAAAAATCCTCCCGATTCTCTCAGAAGAATCGATCAAATCTCGAAAAACGGCGTAAATTCCGGGAATCAGACGGCGACGATGAACTCTGAGATTCTTCCCGGCCAGCCAGGGGGATCGATTGCGCCGATTCCGAGCGGCGCACCGGCAACGAACATGAAGAACAACAACAGCAGCAGCACCAACAACAACAGCGGCGGAGGAGGGGGAAATGCTTACCGATGCGACAGCATGGAGACGCCGGGAGTGGTGATCAAACCGCACACAGGCGGCGATGTGCGATGGGACGCCGTAAACATGGTGTCGAAAGGAGGACAGTTGAATCTGAGCCATTTCAGGCTGCTGAAGCGGCTGGGATATGGCGACATTGGAAGTGTTTATCTGGTGGAACTGAGAGGGACGGATACGTTTTTCGCCATGAAAGTGATGGACAAAGCTTCATTGGCAAGTCGGAATAAGCTTCTGAGGGCGCAGACGGAGAGGGAGATTTTAGGGCTTTTGGATCATCCATTTTTGCCCACTCTGTATTCGTATTTCGAAACTGATAAGTTCTATTGCTTGGTTATGGAGTTTTGTAGCGGTGGTAATCTTCATTCTCTTCGTCAAAAGCAACCCAACAAGTATTTTACAGAAGAAGCTGCCAGGTTCTATGCATCAGAGGTTCTTTTAGCACTGGAATACCTTCACATGTTAGGCATAGTCTACAGAGATTTGAAACCAGAGAACCTGTTAATCCGAGACGAAGGCCACATCATGCTCTCCGATTTCGACCTCTCTCTCCGCTGCTCCGTCAGCCCCACTCTCGTCAAATCCTCCTCCGTCAACGTCAACGGCAGCTCCACTACCGGCAACGGCGGAAGCAACGGCGGCGGCAGCGGTGGCATGCTCGACGACGAGTTCGTCGTCCACGGCTGTATGCAGCCTTCCAACTTCCTCCCTCGCATCCTCCCTTCCAAGAAGAATCGCAAGTCCAAATCCGACTTCGGCCTCTTCGTCGGCGGCGCCCTGCCCGAACTCATGGCCGAGCCCACCAACGTCAGATCTATGTCCTTCGTCGGCACGCACGAGTATTTGGCGCCGGAGATCATCCAAGGCGAAGGCCACGGCAGCGCCGTCGACTGGTGGACCTTCGGGATCTTCCTCTACGAGCTTCTTCACGGAACCACGCCCTTCAAAGGATCTGGAAACAGAGCCACTCTGTTCAACGTCGTCGGACAGCCACTCAGATTCCCGGACTCGCCGCAGGTCAGTCTAGCGGCGAGGGATCTGATCAGAGGCCTCCTCGTGAAGGAGCCGCAAAAGAGAATCGCCTACAGAAGAGGCGCTACTGAGATCAAACAGCATCCCTTCTTCGATGGAGTGAATTGGGCGTTGGTGAGAAGCGCTATGCCGCCGCACGTGCCGGAGCCCGTCGACTTCTCGCAGTTCGCCAGTAAGAAGGGCAGCGGCGGCGGCGGTGTTGGTGGCGTAGGTGGAGGTGGCGGTGGTGGTGGCGGTGGCGGCGGTGGCGGAGTGGTGGAAGAGAAGAAGGCAGTGGAAGTAGTGGCGGAGTCGGGGGGGAATTCTTCGCCTTCTACTGGTAGCGACCCCAATTATGTGGATTTTGAGTACTTCTAG 1785 54.06 MLNCTLHQNLIGDRDLLQPLMWSKSDKKPDGSEMFNNTSKGENDSHGGMNANAPNVVKNPPDSLRRIDQISKNGVNSGNQTATMNSEILPGQPGGSIAPIPSGAPATNMKNNNSSSTNNNSGGGGGNAYRCDSMETPGVVIKPHTGGDVRWDAVNMVSKGGQLNLSHFRLLKRLGYGDIGSVYLVELRGTDTFFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLIRDEGHIMLSDFDLSLRCSVSPTLVKSSSVNVNGSSTTGNGGSNGGGSGGMLDDEFVVHGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIQGEGHGSAVDWWTFGIFLYELLHGTTPFKGSGNRATLFNVVGQPLRFPDSPQVSLAARDLIRGLLVKEPQKRIAYRRGATEIKQHPFFDGVNWALVRSAMPPHVPEPVDFSQFASKKGSGGGGVGGVGGGGGGGGGGGGGGVVEEKKAVEVVAESGGNSSPSTGSDPNYVDFEYF 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25756996 25760977 + Lag0011473.1 Lac1g0981 594552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g0981 594 ProSiteProfiles Protein kinase domain profile. 168 507 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g0981 594 CDD STKc_phototropin_like 166 528 - -
Lac1g0981 594 SUPERFAMILY Protein kinase-like (PK-like) 165 531 IPR011009 -
Lac1g0981 594 Pfam Protein kinase domain 169 321 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g0981 594 Pfam Protein kinase domain 356 507 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g0981 594 MobiDBLite consensus disorder prediction 22 128 - -
Lac1g0981 594 Gene3D Transferase(Phosphotransferase) domain 1 382 525 - -
Lac1g0981 594 PANTHER FLIPPASE KINASE 1-RELATED 110 529 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Lac1g0981 594 MobiDBLite consensus disorder prediction 540 594 - -
Lac1g0981 594 FunFam Serine/threonine-protein kinase AGC1-5 166 251 - -
Lac1g0981 594 FunFam serine/threonine-protein kinase D6PK-like 252 319 - -
Lac1g0981 594 MobiDBLite consensus disorder prediction 105 126 - -
Lac1g0981 594 MobiDBLite consensus disorder prediction 69 90 - -
Lac1g0981 594 MobiDBLite consensus disorder prediction 34 52 - -
Lac1g0981 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac1g0981 594 FunFam Serine/threonine-protein kinase AGC1-7 400 525 - -
Lac1g0981 594 SMART serkin_6 168 507 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g0981 594 Gene3D Transferase(Phosphotransferase) domain 1 252 321 - -
Lac1g0981 594 Gene3D Phosphorylase Kinase; domain 1 166 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g0981 Lac-Chr1:25756996 Lac8g0213 Lac-Chr8:2395477 2.40E-150 dispersed
Lac3g3044 Lac-Chr3:48700894 Lac1g0981 Lac-Chr1:25756996 7.20E-40 transposed
Lac5g2356 Lac-Chr5:42230505 Lac1g0981 Lac-Chr1:25756996 6.00E-88 transposed
Lac1g0981 Lac-Chr1:25756996 Lac11g1572 Lac-Chr11:27336246 2.10E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85877 PF00069 Pkinase 3.10E-21 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g0981 - - - 0.0