Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g0984 ATGGGAGACGGCAATAACACCAACAGAGGCCTTGTCTCGGCCAACGCCGCCGCTAATTCCAACCGGAGCAACAACAACAACAACGGCAGCCACCACAAGAAGCCGGAGTGGCTGCAGCAGTACGATCTAATTGGGAAGATTGGAGAGGGAACCTATGGCCTTGTATTCCTTGCTAAAATCAAACCCCCTTCGCCGAGTCGCGGCAAGTCCATCGCCATCAAGAAGTTCAAGCAATCCAAGGACGGTGATGGCGTCTCCCCAACTGCTATCCGCGAAATTATGTTACTGCGGGAAATATCACACGAGAATGTCGTTAAGCTTGTAAATGTTCATATCAACCATGCAGATATGTCGCTGTATCTAGCTTTTGATTATGCTGAACATGACCTCTATGAAATCATTAGACATCATCGGGACAAGGCTAACCATCCCCTAAATCAGTACACCGTTAAATCCTTACTCTGGCAACTTCTCAATGGATTAAATTATCTCCACAGTAATTGGATCATTCATCGTGATTTAAAGCCATCAAATATTTTGGTTATGGGTGAAGGAGAAGAACAGGGAGTGGTTAAAATAGCTGATTTTGGACTTGCAAGAATATACCAAGCTCCCTTGAAGCCATTATCAGAAAATGGAGTTGTCGTCACCATTTGGTATCGTGCACCTGAACTTCTCCTTGGAGCAAAGCACTACACTAGTGCTGTTGATATGTGGGCTGTTGGATGTATTTTTGCTGAGCTTTTGACGTTGAAGCCATTATTTCAAGGGCAAGAACAGCTTGATCAACTCGACAAGATTTTTAAGGTTTTAGGCCATCCCACGCTGGAGAAGTGGCCAACACTTGCTAATCTTCCACATTGGCAACAAGATGTTCAGCACATACAGGGGCATAAATATGACAATGCTGGATTGTATAATGTTGTCCACCTTTCTCCAAAAAGTCCTGCATATGATCTTCTATCCAAAATGCTCGAGTATGATCCTCGAAAGCGCATAACAGCATCCCAAGCTCTTGAGCATGAGTATTTTCGTTTAGAACCTCTGCCAGGATACAATGCTCTGGTACCAATCCAACCTGGAGAGAAGGTCATTAATTATCCAACTCGCCCTGTGGACACAACCACAGATTTTGAGGGAACAACTAACCTTCAACCTTCACAAACTGTACCATCAGGAAATGTAAACATGCAAGGTGCTCATTCGGTTGCAAACAGATCTGTCCCTCGGCCAATGCCAGGAGTTGGCATGCAAAGGATGCCGCCTCAGAGCATGACTGCTTATAACCTTGCATCCCAGGCTGGGATGGGTATGAATCCTGGTGGCAGTATGAATCCTGGCGGCATCCCTATGCAGCGAGGTGTTTCTGCTCAAGCTCATCAGCAACAACAGGAATGGGAATGCCAGGTTATCCTCCTCAGCAGAAACAACAAAGACGCTACTGAGTGGTATCAGGAAGGTCCAAGATTACTTGTAGGCTTTGCCCAAATTTGTCCGTGCACATCTTACAAAGCTGAGATTAGAGATCCATTTGAAAGAAGAATTGATGTCGATTTGTGGGACAAAAGTTTATCTGGTCACATCTTAGATTACGATTCTGTGTCGGTGGTGTCTGGAATGTCGCGAGACTCTATAGTGATTTCAAGTATGGAATTGTGGCGGTTCCTTGTGATTCTAACCTCTCTCAACTCAAGTCGGTTTCAGAATGGTATGTATAGGGATTGTTGTGTAGTTGTCGACGTGCAAGATGTAGATACTGATGAAGCATCCCGGCCGGGACGCTTGAATGGACACCAGGATGACCGACCGAGATTCTCGATTGTCTCGGATGTAGATACTGGTATATACAACCAGGGGGCAGTCGTAGGCTCATCTCAGGGGAGACAAAATAAGCTCATCCCGGGGGAAGACAAGGGGTTTTACTCGATTTTACATGCCATCAATTCGTCGGTTGAGTGTATTCATTCTTCATTTTGTGTTTGTAAATCATTGTTTCATCTACATAGGGATATCAGTTTTGATCAATCTTCAAGTTTGTGGGATGCCGAGATGGTGAAAAGACCTAAGTGGAGCGCTCGGGACTCGAGAATGACACCAAATAGATCAAGTTTTGAAGCAGCCAAACCAGTGAGACCCGAGAGATGGCGTCGAGACGCCATCCTCAAGCGTCTTGATGTTTCGGAAGCAGAGGGCTAA 2196 45.4 MGDGNNTNRGLVSANAAANSNRSNNNNNGSHHKKPEWLQQYDLIGKIGEGTYGLVFLAKIKPPSPSRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREISHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKANHPLNQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGQEQLDQLDKIFKVLGHPTLEKWPTLANLPHWQQDVQHIQGHKYDNAGLYNVVHLSPKSPAYDLLSKMLEYDPRKRITASQALEHEYFRLEPLPGYNALVPIQPGEKVINYPTRPVDTTTDFEGTTNLQPSQTVPSGNVNMQGAHSVANRSVPRPMPGVGMQRMPPQSMTAYNLASQAGMGMNPGGSMNPGGIPMQRGVSAQAHQQQQEWECQVILLSRNNKDATEWYQEGPRLLVGFAQICPCTSYKAEIRDPFERRIDVDLWDKSLSGHILDYDSVSVVSGMSRDSIVISSMELWRFLVILTSLNSSRFQNGMYRDCCVVVDVQDVDTDEASRPGRLNGHQDDRPRFSIVSDVDTGIYNQGAVVGSSQGRQNKLIPGEDKGFYSILHAINSSVECIHSSFCVCKSLFHLHRDISFDQSSSLWDAEMVKRPKWSARDSRMTPNRSSFEAAKPVRPERWRRDAILKRLDVSEAEG 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25836743 25870482 + Lag0011476.1 Lac1g0984 594555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g0984 731 PANTHER CELL DIVISION PROTEIN KINASE 40 344 IPR050108 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0016592(PANTHER)
Lac1g0984 731 FunFam Putative cyclin-dependent kinase E-1 126 357 - -
Lac1g0984 731 Gene3D Phosphorylase Kinase; domain 1 19 123 - -
Lac1g0984 731 FunFam Cyclin-dependent kinase e-1 29 125 - -
Lac1g0984 731 CDD STKc_CDK8_like 40 344 - -
Lac1g0984 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac1g0984 731 ProSitePatterns Protein kinases ATP-binding region signature. 47 75 IPR017441 GO:0005524(InterPro)
Lac1g0984 731 ProSiteProfiles Protein kinase domain profile. 41 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g0984 731 SMART serkin_6 41 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g0984 731 SUPERFAMILY Protein kinase-like (PK-like) 36 345 IPR011009 -
Lac1g0984 731 Pfam Protein kinase domain 41 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac1g0984 731 Gene3D Transferase(Phosphotransferase) domain 1 124 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g0984 Lac-Chr1:25836743 Lac6g0737 Lac-Chr6:6251344 7.10E-72 dispersed
Lac4g0298 Lac-Chr4:6741332 Lac1g0984 Lac-Chr1:25836743 1.90E-17 dispersed
Lac1g0984 Lac-Chr1:25836743 Lac13g2098 Lac-Chr13:30856801 2.40E-43 wgd
Lac1g0984 Lac-Chr1:25836743 Lac4g1223 Lac-Chr4:29872632 1.70E-17 wgd
Lac1g0984 Lac-Chr1:25836743 Lac4g0659 Lac-Chr4:16195597 2.80E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85878 PF00069 Pkinase 4.10E-68 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g0984 K02208 - csv:101203984 825.083