Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g1551 ATGGCTTCAAGACCAGTCGTTCCCCAACAAATCAGAGGTGAGGCGGCGATAGGAAAGCAGGCGAAAGCCGGGGCGGCGGTGGATGCTAGGAACCGCCGTGCATTGGGCGATATTGGGAATCTGGTAACTGTTCGAGGAATTGACGCAAAGGCAAATCGTCCTATTACAAGGAGTTTCTGTGCTCAGTTGCTTGCCAATGCCCAAGCTGCTGCAAAAGCTGAAAATAATAAGAAACAAGTGCCTGTTAGTGTGGATGGGGCTGCTCCCACTCTTGATGGTGGTGTTGTGGCTGTTAAGAAAGCAGTAGCAGCTCCCAAGCCAGCACCGAAGAAAGTCGTTGCTAAACCGAAAGTCGAGGTGATCGAGATAAGCCCGGATACCGTCGAACAAGGTCGGGGCAAGGAAGTCAAATTTGCAAACAAGAAAAAGGAAGGAGAAGGGGTCTCAAAGAAGAAAGCTCAGACTCTCACTTCAGTCCTGACTGCTAGAAGCAAGGCTGCTTGTGGTGTAACCAAGAAACCCAAAGAGCAGATTTTTGACATTGATGCTGCAGATGCTGGTAATGAGTTGGCAGCAGTTGAGTATGTTGAGGACATTTACAAGTTCTATAAGGAAGTTGAGAATGAGAACAGACCTCATGATTATATGGATTCACAACCTGAGATAAACACTTCAATGAGGGCTATTTTGGTGGATTGGCTGGTTGATGTCCACAACAAGTTCGAGCTTTCGCCCGAAACTTTCTACCTCACGATCAACATAATCGATCGATTCTTGGCGACGAAGGTGGTTCCGAGAAGGGAATTGCAACTGGTGGGCATTGGGGCAATGCTCATAGCTTCCAAATACGAAGAAATCTGGGCACCAGAGGTAAATGACTTTGTGTGCCTTTCAGATAGAGCATACAGTCATGAACAGATACTGGTGACGGAGAAAAAGATACTTGGCAAGCTCGAATGGACATTGACTTTGCCTACACCGTATGTTTTCCTCGCTCGATTCATCAAGGCGTCGAAGGACTCCGATCACGAGATGGAAAATGTGGTTTATTTTCTGGCTGAACTTGGCATAATGCATTACAACACGAGTATAATGTACTGCCCGTCGATGATTGCCGCCTCGGCAGTCTACGCCGCTCGATGCACGCTGAAGAAAACCCCAGCTTGGGATGACACTCTGAAACTGCACACTGGTTTCTCAGAGCCTCAACTAATTGATTGTGCCAAGCTTCTGGTGGGATTCCATGGGGCAGCAAGCAAGAACAAGCTTCAAGTAATATACCGAAAGTACTCGAGCTCCGAGCGGGGAGCGGTAGCGTTGCTTCAGCCAGCCAAAGCTCTGTTGGCTCTTAATGGTGGTGTCCATTGA 1368 48.1 MASRPVVPQQIRGEAAIGKQAKAGAAVDARNRRALGDIGNLVTVRGIDAKANRPITRSFCAQLLANAQAAAKAENNKKQVPVSVDGAAPTLDGGVVAVKKAVAAPKPAPKKVVAKPKVEVIEISPDTVEQGRGKEVKFANKKKEGEGVSKKKAQTLTSVLTARSKAACGVTKKPKEQIFDIDAADAGNELAAVEYVEDIYKFYKEVENENRPHDYMDSQPEINTSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLATKVVPRRELQLVGIGAMLIASKYEEIWAPEVNDFVCLSDRAYSHEQILVTEKKILGKLEWTLTLPTPYVFLARFIKASKDSDHEMENVVYFLAELGIMHYNTSIMYCPSMIAASAVYAARCTLKKTPAWDDTLKLHTGFSEPQLIDCAKLLVGFHGAASKNKLQVIYRKYSSSERGAVALLQPAKALLALNGGVH 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 36801481 36803717 + Lag0012043.1 Lac1g1551 595122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g1551 455 SUPERFAMILY Cyclin-like 326 446 IPR036915 -
Lac1g1551 455 PANTHER CYCLINS 173 431 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Lac1g1551 455 Pfam Cyclin, C-terminal domain 325 443 IPR004367 -
Lac1g1551 455 Gene3D - 198 439 - -
Lac1g1551 455 Pfam Cyclin, N-terminal domain 198 322 IPR006671 -
Lac1g1551 455 CDD CYCLIN_AtCycB-like_rpt1 175 320 - -
Lac1g1551 455 FunFam G2/mitotic-specific cyclin-1 313 439 - -
Lac1g1551 455 PIRSF Cyclin_A_B_D_E 2 453 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Lac1g1551 455 SMART Cyclin_C_2 325 444 IPR004367 -
Lac1g1551 455 SUPERFAMILY Cyclin-like 188 322 IPR036915 -
Lac1g1551 455 SMART cyclin_7 329 413 IPR013763 -
Lac1g1551 455 SMART cyclin_7 232 316 IPR013763 -
Lac1g1551 455 CDD CYCLIN_AtCycB-like_rpt2 325 443 - -
Lac1g1551 455 ProSitePatterns Cyclins signature. 227 258 IPR048258 -
Lac1g1551 455 Gene3D - 212 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1551 Lac-Chr1:36801481 Lac9g2754 Lac-Chr9:45728656 2.80E-111 dispersed
Lac1g1551 Lac-Chr1:36801481 Lac2g0633 Lac-Chr2:4734814 2.00E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g1551 K21777 - csv:101217210 735.717