Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g1566 ATGGAAGGAAAGGGAAATGGAATTGCCAATTTTGTTGAGGGAGCTCAGCCTTACATTGCCATGATCTCCCTCCAATTTGGCTATGCTGGGATGAACATCGTCACCAAGGTCGCTCTCAACCGCGGGATGAGTCACTACGTCCTCGTCACCTATCGCCAGGCCTTTGCCACCGTTGCGCTTGCCCCGTTTGCCTTCTTCCTCGAAAGGAAAGTGAGACCCAAGATTAGTTTCTCTCTGTTGATGCAAATTTTCCTTCTGGGTTTGTTAGGACCAGTGATTGATCAGAACTTTTATTATGCTGGGTTGAAGCTCACATCTCCAACTTTCTCATGTGCTATGAGTAATATGCTGCCTGCAATGACATTCATTTTGGCTCTTCTTTGCAGGATGGAGAAGTTGGAAATGAAGAAATTGAGATGCCAAGCCAAGGTGGTGGGAACAATGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTTTGGTCTCACCATAATTATCTTCACTCTTCTACTCCTCCCAATTACTCCTTTGAAAGCACTCATCAAGATTGGGTCAAGGGCTCCATTCTCCTCCTTTTTGCTAATCTTGCTTGGGCTTTGTTCTTCATCCTTCAGGCAATGACATTGAGAAAGTACACAGCTCATCTTTCACTTACAACCCTAGTGTGCTTCTTGGGGACTTTGCAATCCATGGCTGTCACATTTGTAATGGAAAATAAAGCATCTGTTTGGAACATTGGATGGGACATGAATCTTCTTGCTGCTGCTTATGCTGGAATAGTTTCATCAAGCATAGCTTACTATGTCCAAGGGATGATTATGCAGAAGAGAGGGCCTGTGTTTGTCACAGCCTTTACTCCAATGATCATGATCATTGTTGCCATTATGGGCTCTTTCATGCTCTTTGAGAAGATCTACATCGGACGTGTTCTTGGAGGTGTTCTAATGGTGGTGGGGCTGTACTCAGTGCTATGGGGGAAATACAGAGATTACAAAGAAAAGGAAGCAATAATAGATATTCAAGAGGCCACCATTGTTGAACCAGAGAAGCTTTTATGTGAAGAAAAAGTTGAGAAGAAGAAGAAGAAATTGGCAACAGTAGTTGAAGAAGAAGAAGAAGAAGGAGAAACGACAACAAGATCATTAAACGACATCGAAATGCAGAGGAACGACACAACATCAAATGTCGGCAATAATGTTACAAAATTGTCATGTCCTCCTCCACCACCCATTATTGTTGTAATTGCTGTGGATGAAGCACCATCAAAAGTTTGA 1299 42.88 MEGKGNGIANFVEGAQPYIAMISLQFGYAGMNIVTKVALNRGMSHYVLVTYRQAFATVALAPFAFFLERKVRPKISFSLLMQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFILALLCRMEKLEMKKLRCQAKVVGTMVTVGGAILMTLYKGNVISFFWSHHNYLHSSTPPNYSFESTHQDWVKGSILLLFANLAWALFFILQAMTLRKYTAHLSLTTLVCFLGTLQSMAVTFVMENKASVWNIGWDMNLLAAAYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMGSFMLFEKIYIGRVLGGVLMVVGLYSVLWGKYRDYKEKEAIIDIQEATIVEPEKLLCEEKVEKKKKKLATVVEEEEEEGETTTRSLNDIEMQRNDTTSNVGNNVTKLSCPPPPPIIVVIAVDEAPSKV 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 36941275 36944239 + Lag0012058.1 Lac1g1566 595137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g1566 432 Coils Coil 362 396 - -
Lac1g1566 432 PANTHER WAT1-RELATED PROTEIN 19 355 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac1g1566 432 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
Lac1g1566 432 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020(InterPro)
Lac1g1566 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2273 Lac-Chr10:34563910 Lac1g1566 Lac-Chr1:36941275 4.50E-129 dispersed
Lac13g0802 Lac-Chr13:6425042 Lac1g1566 Lac-Chr1:36941275 7.40E-127 dispersed
Lac1g1566 Lac-Chr1:36941275 Lac2g0909 Lac-Chr2:7137708 3.40E-98 dispersed
Lac12g2189 Lac-Chr12:39017692 Lac1g1566 Lac-Chr1:36941275 7.50E-70 transposed
Lac1g1566 Lac-Chr1:36941275 Lac2g1806 Lac-Chr2:17631706 8.40E-08 wgd
Lac1g1566 Lac-Chr1:36941275 Lac3g1496 Lac-Chr3:13729475 9.10E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g1566 - - - 0.0