Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac1g1605 | ATGCCAGACGCCAGTGTGTCGCTGTCGATCCATTTAAGCTCATCCATTAGTTTTCCATTACTTGAAAGACCTCCAAATACCTTCCTCAGCCTTCACCTAACTCGTGGGCAACTTCATTTTGGCCAGTGGCTGCAGCTGGTGAAAGCGGCTCTGGAGCTGTGCAACCGTAAAAAGTTTGGTGAATCACAACCCATTATACAATTCTTCGCCTTCTACCCAAATCCTGCAATGGATTTCTTACCGTCTTTGGATCCTCAAATCCTTCTGGGTTTGGCTGTGGCTGTTTTAGCCTTCGCAGTTGGTGCTCTCTATTTATTATCCTCCTCCAAGAAAAGCAAATCCAGAGGTTGCTTGGATCCGGAGGTTTTCAAGGAGTTTAAACTTATCAAGCGTGTGCAGCTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCAAATCCTACTTCAGTTTTGGGTCTTCCCATTGGACAACATATAAGTTGCAGGGGCAAGGATGGCCAAGGTGAAGAGGTTATCAAACCGTACACGCCTATTACTTTGGATTCTGATGTTGGATATTTTGAATTGGTCATAAAGATGTATCCCCGAGGAAGGATGTCACACCATTTCCGACAGATGCGTGTCGGTGATTTTCTTGCTGTAAAGGGGCCCAAGGGACGTTTCAGATATCAACCCGGCCAGGTTAGAGCATTTGGGATGCTCGCTGGAGGCTCTGGCATTACTCCTATGTATCAAGTTGCTCGAGCGATATTAGAAAATCCAAATGACAAGACAAAGGTACATCTCATTTATGCCAATGTCACCTACGAGGACATTCTTTTAAAGGAGGAGTTGGATCTTCTTGCCACAAGGTACCCAGATAGCTTCAAGCTCTATTATGTCTTAAACCAGCCTCCGGAAGAGTGGGATGGTGGTGTCGGATTCGTATCGAAGGAAATGATTCAAACCCATTGCCCTGCTCCCGCGTCCGATATTCAGATTTTAAGATGTGGGCCACCCCCAATGAACAAGGCCATGGCTGCTCATCTTGAAGCTCTTGGATATCAACCTGAGATGCTGTTCATGTTCTGA | 1074 | 45.9 | MPDASVSLSIHLSSSISFPLLERPPNTFLSLHLTRGQLHFGQWLQLVKAALELCNRKKFGESQPIIQFFAFYPNPAMDFLPSLDPQILLGLAVAVLAFAVGALYLLSSSKKSKSRGCLDPEVFKEFKLIKRVQLSHNVAKFTFTLPNPTSVLGLPIGQHISCRGKDGQGEEVIKPYTPITLDSDVGYFELVIKMYPRGRMSHHFRQMRVGDFLAVKGPKGRFRYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTYEDILLKEELDLLATRYPDSFKLYYVLNQPPEEWDGGVGFVSKEMIQTHCPAPASDIQILRCGPPPMNKAMAAHLEALGYQPEMLFMF | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 37275908 | 37281931 | + | Lag0012097.1 | Lac1g1605 | 595176 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac1g1605 | 357 | Gene3D | Translation factors | 116 | 215 | - | - | |
Lac1g1605 | 357 | SUPERFAMILY | Ferredoxin reductase-like, C-terminal NADP-linked domain | 213 | 356 | IPR039261 | - | |
Lac1g1605 | 357 | Pfam | Oxidoreductase FAD-binding domain | 126 | 224 | IPR008333 | - | |
Lac1g1605 | 357 | Gene3D | - | 216 | 357 | IPR039261 | - | |
Lac1g1605 | 357 | FunFam | NADH-cytochrome b5 reductase | 215 | 357 | - | - | |
Lac1g1605 | 357 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 95 | 357 | IPR001834 | GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER) | |
Lac1g1605 | 357 | PRINTS | Cytochrome B5 reductase signature | 233 | 252 | - | - | |
Lac1g1605 | 357 | PRINTS | Cytochrome B5 reductase signature | 327 | 335 | - | - | |
Lac1g1605 | 357 | PRINTS | Cytochrome B5 reductase signature | 152 | 163 | - | - | |
Lac1g1605 | 357 | PRINTS | Cytochrome B5 reductase signature | 174 | 181 | - | - | |
Lac1g1605 | 357 | PRINTS | Cytochrome B5 reductase signature | 271 | 282 | - | - | |
Lac1g1605 | 357 | PRINTS | Cytochrome B5 reductase signature | 210 | 224 | - | - | |
Lac1g1605 | 357 | ProSiteProfiles | Ferredoxin reductase-type FAD binding domain profile. | 121 | 225 | IPR017927 | GO:0016491(InterPro) | |
Lac1g1605 | 357 | SUPERFAMILY | Riboflavin synthase domain-like | 118 | 226 | IPR017938 | - | |
Lac1g1605 | 357 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 233 | 252 | IPR001709 | GO:0016491(InterPro) | |
Lac1g1605 | 357 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 271 | 282 | IPR001709 | GO:0016491(InterPro) | |
Lac1g1605 | 357 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 327 | 335 | IPR001709 | GO:0016491(InterPro) | |
Lac1g1605 | 357 | Pfam | Oxidoreductase NAD-binding domain | 234 | 340 | IPR001433 | GO:0016491(InterPro) | |
Lac1g1605 | 357 | CDD | cyt_b5_reduct_like | 126 | 357 | - | - | |
Lac1g1605 | 357 | FunFam | NADH-cytochrome b5 reductase | 116 | 215 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g1605 | Lac-Chr1:37275908 | Lac8g1896 | Lac-Chr8:37221904 | 4.00E-44 | dispersed | |
Lac6g2950 | Lac-Chr6:47099304 | Lac1g1605 | Lac-Chr1:37275908 | 1.30E-54 | transposed | |
Lac9g2955 | Lac-Chr9:47301682 | Lac1g1605 | Lac-Chr1:37275908 | 9.60E-110 | transposed | |
Lac1g1605 | Lac-Chr1:37275908 | Lac10g2390 | Lac-Chr10:36703378 | 3.40E-112 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac1g1605 | K00326 | - | csv:101212569 | 514.998 |