Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g1605 ATGCCAGACGCCAGTGTGTCGCTGTCGATCCATTTAAGCTCATCCATTAGTTTTCCATTACTTGAAAGACCTCCAAATACCTTCCTCAGCCTTCACCTAACTCGTGGGCAACTTCATTTTGGCCAGTGGCTGCAGCTGGTGAAAGCGGCTCTGGAGCTGTGCAACCGTAAAAAGTTTGGTGAATCACAACCCATTATACAATTCTTCGCCTTCTACCCAAATCCTGCAATGGATTTCTTACCGTCTTTGGATCCTCAAATCCTTCTGGGTTTGGCTGTGGCTGTTTTAGCCTTCGCAGTTGGTGCTCTCTATTTATTATCCTCCTCCAAGAAAAGCAAATCCAGAGGTTGCTTGGATCCGGAGGTTTTCAAGGAGTTTAAACTTATCAAGCGTGTGCAGCTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCAAATCCTACTTCAGTTTTGGGTCTTCCCATTGGACAACATATAAGTTGCAGGGGCAAGGATGGCCAAGGTGAAGAGGTTATCAAACCGTACACGCCTATTACTTTGGATTCTGATGTTGGATATTTTGAATTGGTCATAAAGATGTATCCCCGAGGAAGGATGTCACACCATTTCCGACAGATGCGTGTCGGTGATTTTCTTGCTGTAAAGGGGCCCAAGGGACGTTTCAGATATCAACCCGGCCAGGTTAGAGCATTTGGGATGCTCGCTGGAGGCTCTGGCATTACTCCTATGTATCAAGTTGCTCGAGCGATATTAGAAAATCCAAATGACAAGACAAAGGTACATCTCATTTATGCCAATGTCACCTACGAGGACATTCTTTTAAAGGAGGAGTTGGATCTTCTTGCCACAAGGTACCCAGATAGCTTCAAGCTCTATTATGTCTTAAACCAGCCTCCGGAAGAGTGGGATGGTGGTGTCGGATTCGTATCGAAGGAAATGATTCAAACCCATTGCCCTGCTCCCGCGTCCGATATTCAGATTTTAAGATGTGGGCCACCCCCAATGAACAAGGCCATGGCTGCTCATCTTGAAGCTCTTGGATATCAACCTGAGATGCTGTTCATGTTCTGA 1074 45.9 MPDASVSLSIHLSSSISFPLLERPPNTFLSLHLTRGQLHFGQWLQLVKAALELCNRKKFGESQPIIQFFAFYPNPAMDFLPSLDPQILLGLAVAVLAFAVGALYLLSSSKKSKSRGCLDPEVFKEFKLIKRVQLSHNVAKFTFTLPNPTSVLGLPIGQHISCRGKDGQGEEVIKPYTPITLDSDVGYFELVIKMYPRGRMSHHFRQMRVGDFLAVKGPKGRFRYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTYEDILLKEELDLLATRYPDSFKLYYVLNQPPEEWDGGVGFVSKEMIQTHCPAPASDIQILRCGPPPMNKAMAAHLEALGYQPEMLFMF 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 37275908 37281931 + Lag0012097.1 Lac1g1605 595176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g1605 357 Gene3D Translation factors 116 215 - -
Lac1g1605 357 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 213 356 IPR039261 -
Lac1g1605 357 Pfam Oxidoreductase FAD-binding domain 126 224 IPR008333 -
Lac1g1605 357 Gene3D - 216 357 IPR039261 -
Lac1g1605 357 FunFam NADH-cytochrome b5 reductase 215 357 - -
Lac1g1605 357 PANTHER NADH-CYTOCHROME B5 REDUCTASE 95 357 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Lac1g1605 357 PRINTS Cytochrome B5 reductase signature 233 252 - -
Lac1g1605 357 PRINTS Cytochrome B5 reductase signature 327 335 - -
Lac1g1605 357 PRINTS Cytochrome B5 reductase signature 152 163 - -
Lac1g1605 357 PRINTS Cytochrome B5 reductase signature 174 181 - -
Lac1g1605 357 PRINTS Cytochrome B5 reductase signature 271 282 - -
Lac1g1605 357 PRINTS Cytochrome B5 reductase signature 210 224 - -
Lac1g1605 357 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 121 225 IPR017927 GO:0016491(InterPro)
Lac1g1605 357 SUPERFAMILY Riboflavin synthase domain-like 118 226 IPR017938 -
Lac1g1605 357 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 233 252 IPR001709 GO:0016491(InterPro)
Lac1g1605 357 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 271 282 IPR001709 GO:0016491(InterPro)
Lac1g1605 357 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 327 335 IPR001709 GO:0016491(InterPro)
Lac1g1605 357 Pfam Oxidoreductase NAD-binding domain 234 340 IPR001433 GO:0016491(InterPro)
Lac1g1605 357 CDD cyt_b5_reduct_like 126 357 - -
Lac1g1605 357 FunFam NADH-cytochrome b5 reductase 116 215 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1605 Lac-Chr1:37275908 Lac8g1896 Lac-Chr8:37221904 4.00E-44 dispersed
Lac6g2950 Lac-Chr6:47099304 Lac1g1605 Lac-Chr1:37275908 1.30E-54 transposed
Lac9g2955 Lac-Chr9:47301682 Lac1g1605 Lac-Chr1:37275908 9.60E-110 transposed
Lac1g1605 Lac-Chr1:37275908 Lac10g2390 Lac-Chr10:36703378 3.40E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g1605 K00326 - csv:101212569 514.998