Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g1721 ATGAAAGAAACGTCAAGTGGAAGCATCGATCCGAAACGTAGAACAATGAATGAAATTGTGGCATTATTTACAGGCGAATTCCCAACTGCTATAATAGGAGAGCTGGATCCGACTCCCGAACCACCGCAGTCCTTGAAGGCTCCCGCTGCCTCCAATTCCACCGGAAACGGTCAGATCCGTTACCGATCTCCGTCTTCCGCCGAGCTTCTTGAAGGCCAATCGGCCTCTCTTCCACTTCAGGATCAACAGAAACTACTTCAGTTGGAATTTGACAAGATGCATAAGCGTTCCGGGAAGCAACAGTCCGAATCTTTGTCCAATAAGATCTACAGATTCAGAGGGGTGTTGTTGCTCACCTCTCTTTCTCTTTTCCTAATCGCCTTCGTTCTCTATCTCATGCCGGCCCGTGAGGATTACTCCTTCAACCACCGCAAAGTTTCCCCTGATCACAGGTCGTCTTCTTCTAAGACCACTTTTGCTGTTATTTTTGATGCTGGTAGCTCTGGGAGTCGTGTCCATGTCTTTTGCTTCGATCATAATCTCGATCTCCTCCCCGTTGGCAAGGATATCGAACTTTTCGAACAACTTAAACCAGGATTGAGTGCATTTGCTGACAGCCCCAAGGATGCTGCAGCTTCTCTAATTACTCTTCTGGACAAAGCAGAAAATGTGGTTCCAAAAGGGCTGCGGCAGAGGACCCCTGTTAGAGTTGGGGCAACTGCAGGCTTGAGGGCTCTGAAGGGCGATGCATCAGATAGAATTTTGCAGGCGGTTAGGGATCTCCTAAGAGACAAAAGTGACCTCAGGTTGGAGGCAGATGCCGTGTCTGTAATTGATGGAACTCAAGAAGGTTCTTACCTTTGGGTGACATTAAATTATCTACTTGGGAACTTGGGCAAGAAATATTCAGATACAGTTGGAGTTGTAGATCTTGGGGGAGGATCTGTTCAAATGGCATATGCTATCTCAGAAAAGGATGCTGCTCGGCTATCAGATGCAGAGGGTGCATACATAAAAAAGATGTATCTGAAGGGAGCAACTTATTATCTCTATGTTCACAGTTATTTGCATTATGGATTATTAGCTGCTCGAGCAGAGGTTTTGAGTGTTTCTGGAGATTCTAGCAATGATTGCATCCTATCTGGCTACGAAGGAGCATACCATTACGGGGGAAAGGACTACAAAGCATCAGCCTCTTCATCTGGCTCCAGCTTGAATGGATGCAGGAGGACTGTTTTGAAGGCTCTCAAGGTTAATGAATCAACGTGTACTCACATGAAGTGCACTTTTGGTGGTGTTTGGAACGGCGGAGGAGGCGATGGGCAGAAGAATCTCTTCGTTGCTTCATTTTTCTTCGACAGGGCTGCTGAGGCTGGTTTTGTCGACCCCAATAAGCCGTTTGCTACAGCTCGACCTGCAGACTTCAATGATGCTGCGAAGCAGGCATGCCAAATCAAAGTCGAGGACACCTCTACATATCCCAACGTCGAGAAGGGTAACCTGCCGTACTTGTGTATGGATCTTGTGTATCAATACACACTCCTTGTAGATGGATTCGCCCTGGATCCTTGGCAAAAGATCACATTGGTGAAGAAGGTTAAATATCAGAATTCCTTGGTTGAAGCAGCATGGCCTCTAGGCAGTGCCATTGAAGCTGTCTCGTCGTTAGCCTAA 1674 46.89 MKETSSGSIDPKRRTMNEIVALFTGEFPTAIIGELDPTPEPPQSLKAPAASNSTGNGQIRYRSPSSAELLEGQSASLPLQDQQKLLQLEFDKMHKRSGKQQSESLSNKIYRFRGVLLLTSLSLFLIAFVLYLMPAREDYSFNHRKVSPDHRSSSSKTTFAVIFDAGSSGSRVHVFCFDHNLDLLPVGKDIELFEQLKPGLSAFADSPKDAAASLITLLDKAENVVPKGLRQRTPVRVGATAGLRALKGDASDRILQAVRDLLRDKSDLRLEADAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEKDAARLSDAEGAYIKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSGDSSNDCILSGYEGAYHYGGKDYKASASSSGSSLNGCRRTVLKALKVNESTCTHMKCTFGGVWNGGGGDGQKNLFVASFFFDRAAEAGFVDPNKPFATARPADFNDAAKQACQIKVEDTSTYPNVEKGNLPYLCMDLVYQYTLLVDGFALDPWQKITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 38682705 38687696 + Lag0012213.1 Lac1g1721 595292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g1721 557 CDD NBD_sugar-kinase_HSP70_actin 161 341 - -
Lac1g1721 557 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 278 293 IPR000407 GO:0016787(InterPro)
Lac1g1721 557 MobiDBLite consensus disorder prediction 45 61 - -
Lac1g1721 557 MobiDBLite consensus disorder prediction 31 61 - -
Lac1g1721 557 FunFam Apyrase 1 279 534 - -
Lac1g1721 557 Gene3D - 159 550 - -
Lac1g1721 557 Gene3D Exopolyphosphatase. Domain 2 279 534 - -
Lac1g1721 557 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 111 553 IPR000407 GO:0016787(InterPro)
Lac1g1721 557 Pfam GDA1/CD39 (nucleoside phosphatase) family 153 555 IPR000407 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1721 Lac-Chr1:38682705 Lac2g1616 Lac-Chr2:14384491 1.50E-138 dispersed
Lac1g1721 Lac-Chr1:38682705 Lac7g2698 Lac-Chr7:46029948 1.30E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g1721 K14641 - csv:101220305 839.721