Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g1733 ATGGCTGCCTACGCTTTGCTCGGCGACTCCTCCACCGCCCGCCTCAATGCCGGTTTCGACGATAGTCCTTTAACAAGCGCCTCCACGAACAGCAACGCCAGCGAAGAGCATAATCAACAGATCGTTCAACTTCAGGTGCAGGTTTCTCAACCACCACCGCGGTTGCCGGCCGGAAAAATGGTGCGGAAGAGAATCGCGTCGGAGATGGAGATCGAAGGACTCGACGCCGCCGCCGTTCATCCGCGGTTTTGCCGGCGGAGTTCGGCTTCCAATCGTCCTTTTACTGGTGGAGAAAATAAGGCTAATGCGAATTATTGTTCTTCTTCAAACCCTAGCCATGGCGCTAACCACTCCACTGTGCATAATTTAACCGCTCTGACGTCAGTTGTAATCGAAGGGTCAAATTTATCAAATCCTCCTTCTGGTTCTGATGCTACGGCTTCTTCCACTACCTCCAACAACAACTCTTCTCTCATCGATAGTACTCTTCCTGTTCTTCGTCCTCAGCCCCACCATCACCATTTGCAGAATCCTGCAGTCTGTGGTTTCTCTGGTTTGCCTTTGTTCCCACCAGAATCTAATCACCACCATCACAGCAAGTTAAATACTCGCAATAATCCTTTTCCTCTTCCTAATCCATGTCAGGTTGTTCTTCATAATCCTCCTACTACTGCAACGACCTCCATTATCGCCGCTGCTTCTACTCCCATGGATGATTCCTCCGCCACCGCTTGGATCGACGGTATCATCAAGGATTTAATCCATAGCTCGACTGCTATATCCATTCCTCAGCTCATTCAGAACGTTCGTGATATTATTTATCCTTGTAACCCCAATCTTGCGAACCTTCTTGAGTTTCGTCTTCGTACTTTGACGGACCCTAATGTTCCTAACTTCGCCGCCGAGGATCATCGCGTTAGGAAATCGCCCTTGCCGTTGCCGGCGCCGGTGGGCGGCTTGGGGTTGCAGCAGAGGCAGTTCAATCAAGAACATGAACAAGAACAGGATTGTTCTGGGTTGAAGCTTAACCTCGACTCTTCTTCTCTGCATAATCTTCCCAATTTCCCCCCTCAGCCGCCGTTTCATGAGCCGTATCTCCACTGGGGAGCTACTCCTCCGCCGGTCCCCACTCCCTCCGCTGCCGCCGCCGCCGAGGTTTCCGGTCACCATCAACTTAATCTCTCTTCTGTTACACCGTCTTCACTTGTTCCTCTAAACCATGTCCCTTCAAAGCAACAACCAGAACAGCAAAACTCCTGCCCGGTCAATGTGAAGGCAGCGGCGGCGGCGGTGACACAGCCACCGCCCCCGCCGCCGACGAGCAACAACCCTTCAACGACTGCTTTACTGATTAGGGAGATAAAAGAGGAGATGAGGCAACAGAAGAGAGACGAAGAAGGGTTACACCTCTTGACCTTGCTTCTTCAATGTGCAGAAGCCGTTTCTGCTGATAATTTAGAAGAAGCCAACAAGATGCTACTGGAAATCTCTGAGTTATCGACACCCTTCGGCACATCGGCGCAAAGGGTAGCGGCGTATTTCTCAGAAGCAATGTCAGCCAGGCTTGTGAGCTCGTGTCTAGGCATATACGCAGCTCTGCCGCCGGCGTTGGTGCCCCATACGCACAGCCAGAAGATAGCCTCAGCCTTTCAAGTCTTCAATGGCATAAGCCCATTTGTCAAATTCTCACACTTCACTGCCAATCAAGCCATACAAGAAGCCTTCGAAAGGGAAGAGAGAGTTCACATTATAGATCTAGACATCATGCAAGGCCTTCAATGGCCTGGCCTCTTTCACATCCTGGCTTCTCGGCCAGGTGGGCCGCCGTACGTCCGCCTCACAGGGCTGGGGACCTCTCAGGAAGTGCTTGAGGCCACTGGCAAACGCCTCACTGAATTCGCCGAGAAGCTTGGCCTTCCATTTGATTTCTTTCCTGTGGCAGATAAAATCGGCAATCTGGACTTGGATAGGCTCAACGTGAGCAAAAGGGAAGCCGTTGCCGTTCATTGGATGCAGCATTCTCTTTATGAAGTCACTGGTTCTGATTCCAATACGCTATGGCTTTTGCAGAGGTTGGCCCCAAAAGTGGTGACGGTCGTCGAACAAGACCTGAGCCACACAGGCTCCTTCTTGGGGAGATTCGTAGAGGCCATTCATTACTATTCAGCACTGTTCGACTCACTGGGTGTCAGCTACGGCGAAGAGAGTGAAGAGAGGCACTTAGTCGAACAGCAACTGTTGTCAAGGGAGATCAGAAACGTGCTGGCCGTCGGAGGGCCGTCGAGGAGCGGCGAAGTGAAGTTCCAAAACTGGAGAGAAAAGCTGCAGCAATCTGGGTTTAAGGGCATTTCTCTCGCCGGAAATGCTGCAACTCAGGCCACTCTCCTCCTCGGAATGTTCCCCTCCGACGGGTATACGCTTGTGGAAGACAATGGGACTCTGAAGCTTGGGTGGAAGGATCTTTGCTTGCTGACGGCGTCTGCTTGGAAGCCGCCGTTTCATCATCATGCAGTTGCAGCTGCAGCGGCCGCCAACAACCACATTCCCCGGTACTGA 2556 52.0 MAAYALLGDSSTARLNAGFDDSPLTSASTNSNASEEHNQQIVQLQVQVSQPPPRLPAGKMVRKRIASEMEIEGLDAAAVHPRFCRRSSASNRPFTGGENKANANYCSSSNPSHGANHSTVHNLTALTSVVIEGSNLSNPPSGSDATASSTTSNNNSSLIDSTLPVLRPQPHHHHLQNPAVCGFSGLPLFPPESNHHHHSKLNTRNNPFPLPNPCQVVLHNPPTTATTSIIAAASTPMDDSSATAWIDGIIKDLIHSSTAISIPQLIQNVRDIIYPCNPNLANLLEFRLRTLTDPNVPNFAAEDHRVRKSPLPLPAPVGGLGLQQRQFNQEHEQEQDCSGLKLNLDSSSLHNLPNFPPQPPFHEPYLHWGATPPPVPTPSAAAAAEVSGHHQLNLSSVTPSSLVPLNHVPSKQQPEQQNSCPVNVKAAAAAVTQPPPPPPTSNNPSTTALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPALVPHTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQEVLEATGKRLTEFAEKLGLPFDFFPVADKIGNLDLDRLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWKPPFHHHAVAAAAAANNHIPRY 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 38814148 38817081 - Lag0012225.1 Lac1g1733 595304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g1733 851 MobiDBLite consensus disorder prediction 15 38 - -
Lac1g1733 851 ProSiteProfiles GRAS family profile. 461 830 IPR005202 -
Lac1g1733 851 MobiDBLite consensus disorder prediction 134 173 - -
Lac1g1733 851 Pfam GRAS domain family 471 830 IPR005202 -
Lac1g1733 851 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 453 829 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009630(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0051457(PANTHER)|GO:0090610(PANTHER)
Lac1g1733 851 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1733 Lac-Chr1:38814148 Lac5g2324 Lac-Chr5:41913067 2.20E-133 dispersed
Lac1g1733 Lac-Chr1:38814148 Lac3g0856 Lac-Chr3:6861724 1.00E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23249 PF03514 GRAS 2.60E-126 CL0063 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g1733 K27742 - csv:101205286 1301.96