Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac1g1774 | ATGACTTCTGGTCAGCCTCTGCTGGCTTCATCAGAATCAACATCAGTTATTGAATACGGATCCCCATCTCGAAATTTTGGTTCCGTTGGTTGTCTATGTCGCAGTACTTCCTTCACCTCTTCCAGTTCCGACGATGCTCAGAGTGACATTGTGGATGTGAAGGAAAACTGCGCCAGCCCTTTTGAAGATAGCGGTTGGAGTAGTGAGAATTGTCTGAGACAAACCACTTCTCTTTCTAAGAAGAGGCAGTTTTATACAGTTGGCTCTCTATTTCCTCAGCAGCTTCCTTTTGGCTTCCCCACCCAGGATAGAAGACGCCTGGTCTCGTGGGGTGCAATGGAGCTTCATAATATTAATGAGGACCCTGCGAGCTTTGAACTTTCTAGGGTCCAGGAGAAGCTGCATAAGGCTCAAAGAAGTCGTCATAAGAGTTTGCAATTTGATGATAATTTACAGCATGACGATAATCCAAGGTTGATCTACATTAATGATCCAAGGAGAACTAATGACAAGTATGAGTTCACAGGAAATGAGATAACCACTAGCAAGTACACATTGATTACCTTCTTGCCAAAGAACCTCTTTATTCAGTTCCACCGCGTTGCCTATCTTTATTTTCTTGCTATTGCAGCTCTTAACCAGCTTCCTCCTTTGGCAGTCTTTGGGAGAACGGTCTCTCTTTTCCCCCTCCTGTTTGTGCTCTGTGTTACAGCTATTAAAGATGGCTACGAGGATTGGCGTAGACACAGATCAGATCGCAATGAGAACAATAGACAGGCTCTTGTGTTTCAATCTGATGACTTCCGATTGAAAGTGTGGAAAAAAATACGAGCAGGTGAAGTTGTAAAGATTTGTGCAGATGAGGTCATTCCTTGTGACATGGTTTTATTGGGGACAAGTGATCCTAGTGGCCTTGCTTACATTCAAACAATGAATTTAGATGGTGAATCAAACTTGAAGACAAGGTACGCCAGGCAAGAAACAGCATCAGCAGTAGCTGAGGGGTGTTCATATAATGGTCTTATTCGATGTGAACAACCTAATAGGAACATTTATGAGTTCACTGCCAATATGGAATTCAACGGCCATAAATTTCCCCTCAGCCAGTCAAACATCGTCTTGCGTGGTTGTCAGCTGAAGAACACTGAATGGATTATTGGGGTGGTTGTCTATGCTGGACAAGAGACAAAAGCCATGCTAAACAGTGCAGTGTCTCCTGCCAAGCGAAGTAAACTGGAGGGTTACATGAACAGGGAAACATTGTGGTTGTCAATCTTCCTCTTTATCATGTGTCTGGTTGTGGCCCTTGGAATGGGTTTTTGGCTTGTTCGTCACAAGGATCGGCTTGATACCTTGCCATATTATAGGAAAAGGTATTTCACAAATGGGGCAGAGGATGGTAAGAGGTACAGGTTTTATGGAATACCTATGGAGACCTTTTTCTCGTTTTTGAGTTCTATTATAGTGTTTCAGATCATGATACCAATATCCCTTTATATTACAATGGAGATGGTGAGACTGGGTCAGTCATATTTCATGATTGAAGATAAGCACATGTACTGCAGAATCTCTCGCTCAAGGTTCCAGTGCAGATCATTGAATATCAATGAGGATCTTGGTCAAGTTCGCTATGTATTTTCTGATAAAACAGGAACACTTACTGAAAATAAAATGGAATTCAAAAGAGCAAGTGTGTTTGGGAAGAATTACGGGAACAACTTGTCTGAGGGATATTCATCAATGTCGCATTCCATTCCAGCAACTTTAGGGAGGAGGAGGTGGAAACTTCAATCTGACGTTGCTGTTGATACCGAACTTGTCAAATTATTACACAAGGACCTAAACGGAGATGAAAAGATTGCTGCGCATGAATTTTTTCTTACATTGGCTGCATGCAATACTGTGATTCCTATTCTCATGGATGAAAAATCTAGTTATGCAAATGGTGAATTGGACGAGGATTTCGAAACTATTAATTATCAGGGGGAATCCCCTGATGAGCAAGCACTAGTTGCTGCAGCCTCTGCTTATGGATATACTCTTTTTGAGCGCACATCCGGGCATATTGTTATAGATGTCAATGGTGAGAACTTAAGGTTAGATGTTTTGGGTTTACATGAGTTCGATAGTGTTCGCAAAAGAATGTCTGTTGTCATCAGATTCCCCGACAATACTATAAAGGTGCTGGTGAAAGGTGCTGATACTTCAATGTTGAGTGTTTTACGCAATGATTCGGATGGGGAAGAATCGATCAAGCATACTACTCAGAGCCATTTGTGTGAATATTCAATGGAAGGTTTGCGAACACTTGTAGTTGCTGCCAGAGATCTGGCAGATTCTGAATTTGAGCTGTGGCAGAGCAGATATGAGGATGCTAGTACTTCACTGACTGAAAGAGCAGTAAAACTACGTCAGACAGCGGCCCTTATAGAATGTGATCTAAAGCTTTTGGGTGCAACTGCTATTGAGGACAAGCTTCAAGATGGTGTACCTGAAGCCATTGAATCTCTTCGCCAGGCAGGAATAAAGGTTTGGATTCTGACTGGAGATAAGCAGGAGACAGCCATATCAATTGGTCTCTCCTGCAAACTGCTGACTTCAGACATGCTGTCAATTATTATCAATGGAAATTGCGAGAATGATTGCAGGCAACTTTTAAAGGATGCTATCGAAAAATTTGGTATTGCATCAACACAGGGTGGATGTCAAAGACAGAAGCTGAAGAATTGTGAGAATGACTGTCATGATACACCGAAGACATCTAGTATGCCAGATTTTAATGAAGTGAATGAGAAAGAAGAAGAAGGGACTGATAAACAACGAGCTCTAATAATTGATGGAAACAGTTTGGTGTACATTTTGGAGAAGGAATTGGAGTCAGAGCTTTTTGACCTCGCAACTTCATGTGATGTTGTGCTATGCTGTCGTGTCGCACCTTTGCAGAAAGCTGGAATTGTTGATTTGATCAAGAGTAGAACTGATGATATGACATTGGCAATTGGAGATGGGGCCAACGATGTCTCAATGATTCAGATGGCCGATGTAGGCGTTGGTATATGTGGACAGGAAGGGCGTCAAGCAGTAATGGCATCTGATTTTGCCATGGGACAATTTCGCTTTTTAAAAAGATTACTTCTAGTGCATGGACATTGGAACTATCAACGTGTAGGCTACATGGTTCTTTACAACTTCTACCGCAATGCTGTTTTCGTCTTGATGCTCTTCTGGTACATTCTATGCACAGCATTCTCAACAACTTCCGCTTTGACTGATTGGAGTAGTGTGTTTTACTCTGTTATTTATACGTCTATCCCTACTATTTTTGTTGGTATTCTGGACAAAGACTTGAGTCACAAAACTCTACTACAATATCCAAAGCTCTATGGTGCGGGCCATAGACAGGAGGCATATAATTTGCGTCTCTTTTGGTTCACAATGATTGATACCCTGTGGCAGAGTCTTGTTCTCTTCTATGTGCCATTATACATTTACAAGGAGAGTTCCATTGATATATGGAGCTTGGGAAGTCTGTGGACCATAGCAGTTGTTATCCTTGTGAATGTACACTTGGCGATGGATGTTCAACGTTGGGTATATATTACACATGCTGCAGTTTGGGGATCAATAGTCATAACATATGCCTGCATGGTGGTGTTGGATTCGATACCCGTTTTTCCTAATTACTGGGCAATCTTTCATCTGGCTAAGTCCCCGACCTATTGGTTGACTATATTGCTCATAATAGTTGTAGCGTTGCTTCCACGCTATCTATTTAAAGTTGTGAACCAAAGATTTTGGCCCTCAGATATTCAGATAGCCAAAGAAGCCGAGGGTGCTGAGGTAAAGAAACCTACACAGTTTGAAAGAGAAAGGAGAGATTGA | 3882 | 41.83 | MTSGQPLLASSESTSVIEYGSPSRNFGSVGCLCRSTSFTSSSSDDAQSDIVDVKENCASPFEDSGWSSENCLRQTTSLSKKRQFYTVGSLFPQQLPFGFPTQDRRRLVSWGAMELHNINEDPASFELSRVQEKLHKAQRSRHKSLQFDDNLQHDDNPRLIYINDPRRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRQALVFQSDDFRLKVWKKIRAGEVVKICADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETASAVAEGCSYNGLIRCEQPNRNIYEFTANMEFNGHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAVSPAKRSKLEGYMNRETLWLSIFLFIMCLVVALGMGFWLVRHKDRLDTLPYYRKRYFTNGAEDGKRYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEMVRLGQSYFMIEDKHMYCRISRSRFQCRSLNINEDLGQVRYVFSDKTGTLTENKMEFKRASVFGKNYGNNLSEGYSSMSHSIPATLGRRRWKLQSDVAVDTELVKLLHKDLNGDEKIAAHEFFLTLAACNTVIPILMDEKSSYANGELDEDFETINYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTIKVLVKGADTSMLSVLRNDSDGEESIKHTTQSHLCEYSMEGLRTLVVAARDLADSEFELWQSRYEDASTSLTERAVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTSDMLSIIINGNCENDCRQLLKDAIEKFGIASTQGGCQRQKLKNCENDCHDTPKTSSMPDFNEVNEKEEEGTDKQRALIIDGNSLVYILEKELESELFDLATSCDVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKDLSHKTLLQYPKLYGAGHRQEAYNLRLFWFTMIDTLWQSLVLFYVPLYIYKESSIDIWSLGSLWTIAVVILVNVHLAMDVQRWVYITHAAVWGSIVITYACMVVLDSIPVFPNYWAIFHLAKSPTYWLTILLIIVVALLPRYLFKVVNQRFWPSDIQIAKEAEGAEVKKPTQFERERRD | 1293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 39245090 | 39251237 | + | Lag0012266.1 | Lac1g1774 | 595345 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac1g1774 | 1293 | Pfam | Phospholipid-translocating ATPase N-terminal | 160 | 225 | IPR032631 | - | |
Lac1g1774 | 1293 | SFLD | p-type atpase | 530 | 1051 | IPR044492 | - | |
Lac1g1774 | 1293 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 552 | 830 | IPR023299 | GO:0000166(InterPro) | |
Lac1g1774 | 1293 | Gene3D | - | 659 | 797 | IPR023299 | GO:0000166(InterPro) | |
Lac1g1774 | 1293 | SUPERFAMILY | Calcium ATPase, transduction domain A | 257 | 398 | IPR008250 | - | |
Lac1g1774 | 1293 | NCBIfam | phospholipid-translocating P-type ATPase | 174 | 1275 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Lac1g1774 | 1293 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 548 | 554 | IPR018303 | - | |
Lac1g1774 | 1293 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 1028 | 1268 | IPR032630 | - | |
Lac1g1774 | 1293 | Gene3D | - | 556 | 570 | IPR023299 | GO:0000166(InterPro) | |
Lac1g1774 | 1293 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 150 | 1275 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
Lac1g1774 | 1293 | Gene3D | - | 522 | 542 | - | - | |
Lac1g1774 | 1293 | Pfam | haloacid dehalogenase-like hydrolase | 795 | 894 | - | - | |
Lac1g1774 | 1293 | CDD | P-type_ATPase_APLT_Dnf-like | 176 | 1160 | - | - | |
Lac1g1774 | 1293 | Pfam | E1-E2 ATPase | 258 | 503 | - | - | |
Lac1g1774 | 1293 | SFLD | C1.7: P-type atpase like | 530 | 1051 | - | - | |
Lac1g1774 | 1293 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 174 | 1267 | IPR023298 | - | |
Lac1g1774 | 1293 | Gene3D | - | 236 | 402 | - | - | |
Lac1g1774 | 1293 | NCBIfam | HAD-IC family P-type ATPase | 971 | 1086 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac1g1774 | 1293 | NCBIfam | HAD-IC family P-type ATPase | 479 | 571 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac1g1774 | 1293 | Gene3D | - | 543 | 555 | IPR023214 | - | |
Lac1g1774 | 1293 | FunFam | Phospholipid-transporting ATPase | 660 | 804 | - | - | |
Lac1g1774 | 1293 | Gene3D | - | 814 | 1040 | IPR023214 | - | |
Lac1g1774 | 1293 | Pfam | Cation transport ATPase (P-type) | 662 | 739 | - | - | |
Lac1g1774 | 1293 | SUPERFAMILY | HAD-like | 807 | 1048 | IPR036412 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g0743 | Lac-Chr12:7764827 | Lac1g1774 | Lac-Chr1:39245090 | 2.60E-147 | dispersed | |
Lac1g1774 | Lac-Chr1:39245090 | Lac8g2267 | Lac-Chr8:40900203 | 0.00E+00 | dispersed | |
Lac1g1774 | Lac-Chr1:39245090 | Lac13g0439 | Lac-Chr13:3104800 | 4.30E-189 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac1g1774 | K14802 | - | csv:101206692 | 2329.29 |