Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g1866 ATGGAAGATTATTACGATCGCCGTAGTGGTCTCATTCATCGGCGCCAGAATCGGATCGGCGTGAATGCGGAGGCGGGGGATAGGTTTCCGCCGTGGAGCGTACCGGAGACCAAGGAACTGCTTGCGATCAGAGCGGCGCTCGATAAGAGTTTCTCGGAGATTAAACACAATAGAACGCTTTGGATTTCGGTCGCCGGTGAAATGAAGGCGAAAGGCTTCAATCGGAATGATGAGCAGTGTAAGTGCAAGTGGAAAAATCTTGTCACTCGCTATAAGGGTTGCGAAACTATGGATTCCAAAGCTCTAAAGCAACAATTTCCATTTTACGACGAACTCCACACCATTTTTACTGCAAGGATGCAAAAGAACTGGTGGATCGAAGCCAATGATCGATCGAGAGGCACCAAAAGGAAAGCCATCGAGCGATTCTCCAGCGAAGATCACAACAGTAATAGAGAAGGAAACGACGAAGAAGACGAAGACAAAGCATTCGGGTCAACGAAGAAGACGATAAAGAAGGACAAATGTGGGAGAGAGGAAGATGATCAAGAGAGCAATTTGAAGGAAATATTGAAGGGTTTTGTGGAAAGAGAGATGGAAATGGAAAGGCAATGGAGAGAAGCATTTAGGGTTAGAGAGGAAGAGAGAAGGTTGAAGGAGGAAGAATGGAGGATGAAAATGGAAGCCCTAGAGAGAGAGAAGATGATGATGGAGATTATGTGGAGAGAGAAAGAAGAGGAGATGAGAGAGAGAGAGGAGGCTAGGGCTGAGAAGAGAGATGCTTTGATCTCAGCTTTGTTGACCAGGCTCATAAGATCATAA 822 46.11 MEDYYDRRSGLIHRRQNRIGVNAEAGDRFPPWSVPETKELLAIRAALDKSFSEIKHNRTLWISVAGEMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDSKALKQQFPFYDELHTIFTARMQKNWWIEANDRSRGTKRKAIERFSSEDHNSNREGNDEEDEDKAFGSTKKTIKKDKCGREEDDQESNLKEILKGFVEREMEMERQWREAFRVREEERRLKEEEWRMKMEALEREKMMMEIMWREKEEEMREREEARAEKRDALISALLTRLIRS 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 40346144 40348538 - Lag0012358.1 Lac1g1866 595437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g1866 273 CDD GT1 32 95 - -
Lac1g1866 273 Pfam Myb/SANT-like DNA-binding domain 31 114 IPR044822 -
Lac1g1866 273 MobiDBLite consensus disorder prediction 140 182 - -
Lac1g1866 273 PANTHER FI21293P1 20 272 - -
Lac1g1866 273 Coils Coil 227 264 - -
Lac1g1866 273 ProSiteProfiles Myb-like domain profile. 31 88 IPR001005 -
Lac1g1866 273 FunFam Zinc finger and SCAN domain-containing 20 32 93 - -
Lac1g1866 273 Gene3D - 32 93 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1866 Lac-Chr1:40346144 Lac5g2271 Lac-Chr5:41413814 5.20E-20 dispersed
Lac1g1866 Lac-Chr1:40346144 Lac10g3229 Lac-Chr10:46383161 3.20E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23255 PF13837 Myb_DNA-bind_4 4.30E-18 CL0123 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g1866 - - - 0.0