Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g1928 ATGGCCGAACAATTGCAGGTCTTTGGTGCTAGGACAAGTCCCTTCAGTCGCAGAGTGGAGCTGGCTCTCAGACTCAAAGGCCTCGAATACCAATACGTCGAGGAAGATTTGCCAAACAACAAGAGCGATTTGCTTCTCAAATACAACCCAATTCACAAGAAAGTGCCTGTCCTCGTCCACCATGGCAAACCCATTGCAGAGTCTCTGGTCATCCTCGAATACATGGATGAAAACTGGAAAGCCAACCCCATCTTGCCGCAACATCCCCATCAAAGAGCTCTCGCAAGGTTCTGGGCTAAGTTCATCGACGACAAGGTTGTGTCTGCGGTAGTGAAGGCTGCTGGAAGCGAAGGGGAAGAGAGAGAGAAGGGTGTAGAAGAAGCAGGGGAGACGTTAGAAGCACTTGAGAATGAGCTGAAGAACGACAAGTTCTTCGGGGGAGAGAGAATTGGGTTTGTGGATATTGTTGGCATTGTCGTGGCCCAATGGGTTCCTGCCATTGAACAAAGTTTTGGGTTTGAGGTGTTGAGAAGTGACAAGTTTCCAAATTTATGCAGATGGAGTGAGGAGCTTGTGAACCATGGCGTGGTGAAGGAGATTCTGCCTCCAAGACATGAGATTGCTGCCTTTATCCAAGCTAATTGGAAATTTCAAAAGTAG 660 48.18 MAEQLQVFGARTSPFSRRVELALRLKGLEYQYVEEDLPNNKSDLLLKYNPIHKKVPVLVHHGKPIAESLVILEYMDENWKANPILPQHPHQRALARFWAKFIDDKVVSAVVKAAGSEGEEREKGVEEAGETLEALENELKNDKFFGGERIGFVDIVGIVVAQWVPAIEQSFGFEVLRSDKFPNLCRWSEELVNHGVVKEILPPRHEIAAFIQANWKFQK 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 40918538 40919299 + Lag0012420.1 Lac1g1928 595499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g1928 219 Pfam Glutathione S-transferase, C-terminal domain 102 193 IPR004046 -
Lac1g1928 219 CDD GST_N_Tau 5 79 - -
Lac1g1928 219 Gene3D - 85 219 - -
Lac1g1928 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 217 IPR010987 -
Lac1g1928 219 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Lac1g1928 219 CDD GST_C_Tau 89 213 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lac1g1928 219 SFLD Main.3: Omega- and Tau-like 2 213 IPR045073 -
Lac1g1928 219 FunFam Tau class glutathione S-transferase 85 218 - -
Lac1g1928 219 SFLD Glutathione Transferase (cytosolic) 2 213 IPR040079 -
Lac1g1928 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Lac1g1928 219 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Lac1g1928 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Lac1g1928 219 Gene3D Glutaredoxin 1 84 - -
Lac1g1928 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 212 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Lac1g1928 219 FunFam Tau class glutathione S-transferase 1 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1928 Lac-Chr1:40918538 Lac1g1943 Lac-Chr1:41036196 1.60E-88 dispersed
Lac1g1928 Lac-Chr1:40918538 Lac1g1929 Lac-Chr1:40928949 6.20E-88 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g1928 K00799 - csv:105435246 310.457