Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g1929 ATGGCGGAAGAAGTGCAAGTGTTAGGTGCATGGATGAGTCCCTTCAGTCGCAGAGTGGAGTTGGGTTTGAAACTCAAAGGCGTAAAATACGAATATATTGAGGAAGACTTGAAGAAGAAGAGTGATTTGCTTGTGAAATACAACCCACTTCACAAGAAGGTGCCTGTTCTTCTTCACTGTGGAAAACCCATTGCAGAGTCCATCATCGTCCTCGAATACATTGATGAAAACTGGAAAGCCAACCCCATGCTGCCTCAGGATCTCCATGATAGAGCTCGAGCAAGGTTCTGGGCCAAGTATATCGATGACAAGGTTCTGCCTGCGGTACTAAAGGCTGCTCGAAGCAAAGGAGAAGAGAGAGAGAAGGCTGTAGCAGAAGCAGGGGAGACATTAGAAGCACTTGAGAAAGAGCTGAAAAGCAGCAAGTTTTTTGGAGGAGAAAGAATTGGGTTTGTGGACATTGTTGCCACTCTAGTAGCCTACTGGGTTCCTGCCATTGAAGAAGGTTTTGGATTTGAGCTGCTCACCAGTAACAACTTTCCAAACTTGAGCAAATGGAGTGAAGAGCTTGTGAACCACAGCGTCGTGAAGGAGATTCTGCCTCCAAAGCCTAAGCTTGTGGCCTATTTGCAAACTGTTCTTCCAAGAAACTAG 654 46.02 MAEEVQVLGAWMSPFSRRVELGLKLKGVKYEYIEEDLKKKSDLLVKYNPLHKKVPVLLHCGKPIAESIIVLEYIDENWKANPMLPQDLHDRARARFWAKYIDDKVLPAVLKAARSKGEEREKAVAEAGETLEALEKELKSSKFFGGERIGFVDIVATLVAYWVPAIEEGFGFELLTSNNFPNLSKWSEELVNHSVVKEILPPKPKLVAYLQTVLPRN 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 40928949 40929714 + Lag0012421.1 Lac1g1929 595500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g1929 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lac1g1929 217 FunFam Tau class glutathione S-transferase 1 86 - -
Lac1g1929 217 Gene3D Glutaredoxin 1 83 - -
Lac1g1929 217 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Lac1g1929 217 Gene3D - 84 216 - -
Lac1g1929 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 211 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Lac1g1929 217 Coils Coil 117 137 - -
Lac1g1929 217 FunFam Tau class glutathione S-transferase 84 216 - -
Lac1g1929 217 SFLD Glutathione Transferase (cytosolic) 2 212 IPR040079 -
Lac1g1929 217 SFLD Main.3: Omega- and Tau-like 2 212 IPR045073 -
Lac1g1929 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 210 IPR010987 -
Lac1g1929 217 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Lac1g1929 217 CDD GST_C_Tau 89 211 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lac1g1929 217 CDD GST_N_Tau 5 78 - -
Lac1g1929 217 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Lac1g1929 217 Pfam Glutathione S-transferase, C-terminal domain 96 192 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0315 Lac-Chr13:2266514 Lac1g1929 Lac-Chr1:40928949 2.50E-47 dispersed
Lac1g1929 Lac-Chr1:40928949 Lac1g1947 Lac-Chr1:41060088 2.20E-82 dispersed
Lac1g1928 Lac-Chr1:40918538 Lac1g1929 Lac-Chr1:40928949 6.20E-88 tandem
Lac1g1929 Lac-Chr1:40928949 Lac1g1930 Lac-Chr1:40939200 6.60E-26 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g1929 K00799 - csv:101214992 297.745