Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac1g1943 | ATGGCAGCTGAACAAGTGCAGGTCTTTGGTTTTCGGTCAGGACCCTTCAGTCTGAGAGTGGAGTTGGCTCTCAGGCTCAAAGGCGTAGCTTACGAACACATCGAGGAAGATTTGCTAAACAAGAAGAGCGATTTGCTTCTGAAATACAACCCAATCTACAAGAAGGTGCCTGTCCTCGTCCACCATGGCAAACCCATTTCAGAGTCTCTCGTCATCCTCGAATACATCGAAGAAACTTGGAGAGACAACCCCATCTTCCCCCAACATCCCCATGAGAAAGCTCTTGCCAGGTTTTGGGCTAAGTACATCGATGACGAGGTTTTGCCTGCGGTACAGAAAGCTGCTCGAAGCAAAGAAGAAGAGAGAGAGAAGGGTGTAGAAGAAGCGCAGGAGACGTTGGAACCACTTGAGAAAGAGCTTGAAAACAACAAGTTCTTCGGAGGAGAGAGAATTGGATTCGTGGACATTGTCGGCCTGGTTTTAGCCCGTTGGATTCCTGCCATTGAAGAAGCTGTAGGGTTTGAGCTGCTAAGAAGCCAGAAGTTTCCAAACCTAAGAAAATGGAGTGAAGAGTTCGTGAACCACAGCGTCGCGAAGGAAGTTTTGCCTGAAAAGGATGCGCTTGTTGGCTTTCTGAAAGATGTTACGTTTAATCAAAAAGACTAG | 666 | 47.3 | MAAEQVQVFGFRSGPFSLRVELALRLKGVAYEHIEEDLLNKKSDLLLKYNPIYKKVPVLVHHGKPISESLVILEYIEETWRDNPIFPQHPHEKALARFWAKYIDDEVLPAVQKAARSKEEEREKGVEEAQETLEPLEKELENNKFFGGERIGFVDIVGLVLARWIPAIEEAVGFELLRSQKFPNLRKWSEEFVNHSVAKEVLPEKDALVGFLKDVTFNQKD | 221 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 41036196 | 41036935 | - | Lag0012435.1 | Lac1g1943 | 595514 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac1g1943 | 221 | Pfam | Glutathione S-transferase, C-terminal domain | 98 | 194 | IPR004046 | - | |
Lac1g1943 | 221 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 4 | 84 | IPR004045 | - | |
Lac1g1943 | 221 | SUPERFAMILY | GST C-terminal domain-like | 78 | 213 | IPR036282 | - | |
Lac1g1943 | 221 | FunFam | Tau class glutathione S-transferase | 86 | 220 | - | - | |
Lac1g1943 | 221 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 217 | IPR010987 | - | |
Lac1g1943 | 221 | CDD | GST_C_Tau | 90 | 214 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Lac1g1943 | 221 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 5 | 213 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Lac1g1943 | 221 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 78 | IPR004045 | - | |
Lac1g1943 | 221 | Gene3D | - | 86 | 220 | - | - | |
Lac1g1943 | 221 | SFLD | Main.3: Omega- and Tau-like | 2 | 214 | IPR045073 | - | |
Lac1g1943 | 221 | SUPERFAMILY | Thioredoxin-like | 5 | 107 | IPR036249 | - | |
Lac1g1943 | 221 | CDD | GST_N_Tau | 6 | 80 | - | - | |
Lac1g1943 | 221 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
Lac1g1943 | 221 | SFLD | Glutathione Transferase (cytosolic) | 2 | 214 | IPR040079 | - | |
Lac1g1943 | 221 | FunFam | Tau class glutathione S-transferase | 1 | 88 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g1928 | Lac-Chr1:40918538 | Lac1g1943 | Lac-Chr1:41036196 | 1.60E-88 | dispersed | |
Lac1g1943 | Lac-Chr1:41036196 | Lac1g1947 | Lac-Chr1:41060088 | 7.90E-75 | dispersed | |
Lac1g1943 | Lac-Chr1:41036196 | Lac1g1944 | Lac-Chr1:41045340 | 1.20E-104 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac1g1943 | K00799 | - | csv:101215228 | 333.569 |