Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g1944 ATGGCAGCTGAACAAGTGCAGGTCTTTGGTTTCCGGTCGGGCCCCTTCAGTCTGAGAGTGGAGTTGGCTCTCAGGCTCAAAGGCGTGGCTTACGAACACATTGAGGAAGATTTGCTGAACAACAACAAGAGCGATTTGCTTCTGAAATACAACCCCATCTACAAGAAGGTGCCTGTCCTCGTCCACCATGGCAAACCCATTTCAGATTCTCTCGTCATCCTCGAATACATCGATGAAACTTGGAGAGACAACCCCATCTTCCCCCAACATCCCCATGACAGAGCTCTTGCCAGGTTTTGGGCTAAGTATATCGATGACAAGGTTCTGGCCGCATTACAGAAATTTCCTTCATGCAAAGAAGAAGAAGAGAGAGAGAAGGCTATAGAAGAAGCACAGGAAATATTAGAACCACTTGAGAAAGAGTTAAAAGACAAGAAGTTCTTTGGAGGTGAGAAAATTGGATTTGTGGACATTGTCGGGCTCGTTTTAGCCCGCTGGATTCCTGCCTCTGAAGAAGCTGGAGGGTTCGAGCTGCTGACAAGCCAGAGGTTCCCAAACCTAAAAACATGGAGTGAAGAGTTTGTGAATCACAGCGTGGCAAAGGAGGTTCTGCCTCAGAAAGATGCGCTCGTTGCCTTTTTGAAAAACGTTGCGTTTAATCGAAAAAACTAG 672 46.73 MAAEQVQVFGFRSGPFSLRVELALRLKGVAYEHIEEDLLNNNKSDLLLKYNPIYKKVPVLVHHGKPISDSLVILEYIDETWRDNPIFPQHPHDRALARFWAKYIDDKVLAALQKFPSCKEEEEREKAIEEAQEILEPLEKELKDKKFFGGEKIGFVDIVGLVLARWIPASEEAGGFELLTSQRFPNLKTWSEEFVNHSVAKEVLPQKDALVAFLKNVAFNRKN 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 41045340 41046391 - Lag0012436.1 Lac1g1944 595515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g1944 223 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Lac1g1944 223 CDD GST_C_Tau 91 215 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lac1g1944 223 SFLD Main (cytGST) 2 217 - -
Lac1g1944 223 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Lac1g1944 223 FunFam Tau class glutathione S-transferase 87 222 - -
Lac1g1944 223 Pfam Glutathione S-transferase, C-terminal domain 100 196 IPR004046 -
Lac1g1944 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Lac1g1944 223 SUPERFAMILY GST C-terminal domain-like 79 216 IPR036282 -
Lac1g1944 223 CDD GST_N_Tau 6 81 - -
Lac1g1944 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 219 IPR010987 -
Lac1g1944 223 Coils Coil 121 141 - -
Lac1g1944 223 Gene3D Glutaredoxin 1 86 - -
Lac1g1944 223 FunFam Tau class glutathione S-transferase 1 89 - -
Lac1g1944 223 Gene3D - 87 222 - -
Lac1g1944 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Lac1g1944 223 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1944 Lac-Chr1:41045340 Lac7g0355 Lac-Chr7:2733001 4.50E-54 dispersed
Lac1g1944 Lac-Chr1:41045340 Lac1g1947 Lac-Chr1:41060088 4.80E-72 proximal
Lac1g1943 Lac-Chr1:41036196 Lac1g1944 Lac-Chr1:41045340 1.20E-104 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g1944 K00799 - csv:101215228 306.219