Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac1g1947 | ATGGCGGAAGGGCTGCAGGTGTTTGGTTCCTGGGCAAGTCCCTTTAGCCGGCGAGTGGAGTTGGCTCTCAAACTCAAAGCCCTAAGATACCTATATATTGAGGAAAACTTGACCAACAAGAGCCATTTGCTTCTGAAATACAACCCACTCCACAAGAAGGTGCCTGTCCTCGTCCACAATGGCAAACCCATTGCAGAGTCTCTTGTCATCCTCGAATACATTGATGAAATTTGGAAAGCCAACCCCATCTTGCCCCAACATCCCCATCAAAGAGCTCAAGCAAGATTCTGGGCCAACTATATTGACGACAAGTTTTTTTCTGCGTGGCGGAAAACTGTTCGAAGTCAAGGAGAAGAGAGAGAGAAGGCGGTAGAGGAAGCATGTAAGGCGTTGGAACCACTTGAGAATGAGCTCAAAAGCAACAAGTTCTTTGGAGGAGACAGCATCGGGTTGGTGGACATTGTTGGCATCTTCATAGGCTACTGGGTTCCTGTCATGCAACAAGCTCTTGGGTTTCAGATTCTGAGCAGCCACAAGTTTCCAAACCTAACCAAATGGAGTGAAGAGCTTATGAACCACAGCGTCGTGAAGGAGGTTCTGCCTCCAAAAGATAGCCTTTTTGCTTATACTCAAACTCTTTATAAAAGAAATGTCGGTTCTAAGCTGTGA | 669 | 46.49 | MAEGLQVFGSWASPFSRRVELALKLKALRYLYIEENLTNKSHLLLKYNPLHKKVPVLVHNGKPIAESLVILEYIDEIWKANPILPQHPHQRAQARFWANYIDDKFFSAWRKTVRSQGEEREKAVEEACKALEPLENELKSNKFFGGDSIGLVDIVGIFIGYWVPVMQQALGFQILSSHKFPNLTKWSEELMNHSVVKEVLPPKDSLFAYTQTLYKRNVGSKL | 222 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 41060088 | 41061860 | - | Lag0012439.1 | Lac1g1947 | 595518 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac1g1947 | 222 | FunFam | Tau class glutathione S-transferase | 84 | 220 | - | - | |
Lac1g1947 | 222 | Gene3D | Glutaredoxin | 1 | 83 | - | - | |
Lac1g1947 | 222 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 212 | IPR010987 | - | |
Lac1g1947 | 222 | SUPERFAMILY | Thioredoxin-like | 5 | 106 | IPR036249 | - | |
Lac1g1947 | 222 | CDD | GST_C_Tau | 88 | 213 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Lac1g1947 | 222 | FunFam | Tau class glutathione S-transferase | 1 | 86 | - | - | |
Lac1g1947 | 222 | Gene3D | - | 84 | 221 | - | - | |
Lac1g1947 | 222 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 6 | 210 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Lac1g1947 | 222 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Lac1g1947 | 222 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Lac1g1947 | 222 | SFLD | Main.3: Omega- and Tau-like | 3 | 216 | IPR045073 | - | |
Lac1g1947 | 222 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Lac1g1947 | 222 | SFLD | Glutathione Transferase (cytosolic) | 3 | 216 | IPR040079 | - | |
Lac1g1947 | 222 | Pfam | Glutathione S-transferase, C-terminal domain | 97 | 193 | IPR004046 | - | |
Lac1g1947 | 222 | SUPERFAMILY | GST C-terminal domain-like | 76 | 216 | IPR036282 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g0259 | Lac-Chr13:1864980 | Lac1g1947 | Lac-Chr1:41060088 | 3.60E-46 | dispersed | |
Lac1g1929 | Lac-Chr1:40928949 | Lac1g1947 | Lac-Chr1:41060088 | 2.20E-82 | dispersed | |
Lac1g1930 | Lac-Chr1:40939200 | Lac1g1947 | Lac-Chr1:41060088 | 4.30E-24 | dispersed | |
Lac1g1943 | Lac-Chr1:41036196 | Lac1g1947 | Lac-Chr1:41060088 | 7.90E-75 | dispersed | |
Lac1g1947 | Lac-Chr1:41060088 | Lac7g0355 | Lac-Chr7:2733001 | 9.70E-57 | dispersed | |
Lac1g1944 | Lac-Chr1:41045340 | Lac1g1947 | Lac-Chr1:41060088 | 4.80E-72 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac1g1947 | K00799 | - | csv:105434443 | 271.552 |