Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2044 ATGGCGATCTCTGGGTTTCGAGCTCTTCTATGGTGGAGAAAATGGTCCAAGAAAGACTGGGCGGTTGCAGTCATCTGCTTCGCTTTCATTGTTTTCGTTCTCTCTTTCCTCTCCGACTCTTGGCACGCTGAAGACGCTGGCGTCGATCACACTTTCGATCTCAATCCCGCCAATGACCCCGATTTGGTTGACCTGTCCTTGCTGCAGAATGCCAAAGCAAAAGGCGCTTTATGTCTTGATGGGAGCTTGCCTGGATACCATTTTCAGAAAGGGTTTGGATCTGGTTCTGGCAACTGGGTGCTTCACATTGAGGGTGGAGGTTGGTGCGATACAGTCTCGTCCTGTTCTTTGCGTAAAATGACTCCGTTAGGTTCATCAGACTACATGGATCGTCGTGTTCGTTTTTCTGGAATTTTAAGTAGTGATGCATCCAAAAATCCTGATTTCTATAATTGGAACAAAGTCAAGATACGTTACTGTGATGGAGCATCGTTTGCAAGCCATCCTGAGGGTGAAATAAAGAATGGAAATAGACTTTATTTCAGAGGCCAGCTCATCTGGGAAGCGCTTATGGATGAACTCTTATCCGTTGGCTTGTCAAAGGCAAGGCAGGCTCTTCTTTCAGGGTGCTCTGCTGGGGGCTTGGCTACCCTTATACATTGTGATGACTTCAGAGAGCTTTTGCCGAAGGATGCAACTGTCAAGTGTCTAGCTGATGCTGGATTTTTCCTTGACGAGAAAGATGTTTCGGGAAATCATACAATGAGATCTTTCTATCATGATGTTTTCAACCTTCAGAACACTGCTAAAAGCTTACCCAAGGATTGTACAGCAGCAGAAGAGCCATCTAAGTGTCTCTTCCCTCAAGAAATTATCAAACATATAAGGACCCCGCTGTTTCTTGTCAACCCAGCTTATGATTTCTGGCAGATACAACATGTCTTGGTACCAAGTGCATTAGATCCTGCTGGCTCTTGGCAGAAATGTAGGCTTAATATTCATAAATGTGATCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGGGACTCTTTGCTGAAGGCACTGAAGGACTTCAAGCACAACAAGGAAGGGGGACTTTTTGTAAATTCCTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAGGACTATAGCAGAGGCCGTGGGCGATTGGTACTTCAAACGAAATTCAGTGAAGCTAATTGACTGCCCTTTTCCATGCAATCCCACCTGCATTCATATGGATTTTAGCTGA 1290 45.04 MAISGFRALLWWRKWSKKDWAVAVICFAFIVFVLSFLSDSWHAEDAGVDHTFDLNPANDPDLVDLSLLQNAKAKGALCLDGSLPGYHFQKGFGSGSGNWVLHIEGGGWCDTVSSCSLRKMTPLGSSDYMDRRVRFSGILSSDASKNPDFYNWNKVKIRYCDGASFASHPEGEIKNGNRLYFRGQLIWEALMDELLSVGLSKARQALLSGCSAGGLATLIHCDDFRELLPKDATVKCLADAGFFLDEKDVSGNHTMRSFYHDVFNLQNTAKSLPKDCTAAEEPSKCLFPQEIIKHIRTPLFLVNPAYDFWQIQHVLVPSALDPAGSWQKCRLNIHKCDHAQLEILQGFRDSLLKALKDFKHNKEGGLFVNSCFIHCQTWMSETWHSPNSPRINKRTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFS 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 41980354 41986697 + Lag0012536.1 Lac1g2044 595615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2044 429 PANTHER NOTUM-RELATED 38 425 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Lac1g2044 429 Pfam Pectinacetylesterase 60 409 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2044 Lac-Chr1:41980354 Lac3g3083 Lac-Chr3:49273258 3.60E-124 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2044 K19882 - csv:101206380 831.632