Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2190 ATGAGGTTTTCCCTTCCTTCCCCTTTCATTTCGCTTTCGTCTCTTTCCAATTTCCACCATGTGAACACAACAAAGTCCAACTGCAAGTGCAGCCTAGCAAAACATCTTCATCAATCAACTCTTCCATCTCTCTATAAGGCTGCAATTCAATGCGCTGCAATCATGAGAGGCGCAAGATTCAGCTTCAGTATCAGAACTGGGCGAAGACAGATGAGGAATTTCGCCTTACAAGTTCTATTGGGCCGATGGTTCACCGTTTTCGCTTCTTTACTGATCATGTCCGTTTCCGGCGCCACCTACATGTTCGCACTCTACTCCGCCGACATCAAATCCTCCTTGAATTACGACCAGACCACTCTCAACCTCATCGGCTTCTTCAAGGATCTCGGTGCCAACGTCGGAGTCCTCTCCGGCCTCATCAATGAAATCACGCCGCCTTGGGTCGTCCTCTTCATTGGCGGGGTAATGAATTTCTTTGGCTATTTCATGATTTGGCTCTCTGTCACTCACCGAATCCACAAACCCAATGTGCCCGCAATGTGTTTGTATATATTCCTAGGTGCCAATTCTCAGACCTATGCCAATACAGGGGCTTTGATTCCTTCTGTGAAGAATTTTCCCGAGAATCGAGGTAATGTTTTGGGGTTGTTGAAAGGGTTTGTTGGTTTAAGTGGGGCAATTTTGACTCAGCTTTACCGTGCTTTTTATGGGGATGATTCTAAAGATTTTATCTTGCTTATTGCTTGGCTGCCAACTGCTGTTTCTTTCCTACTTCTTCGGATTGTTAGAGTAGTGGAAGTAAATGGAATATCCAAGTCTAATGATCTCAAAAATTTCTATCACATGCTTTACATTTCCCTTGGTCTTGCTGGCTTCCTCATGGTTTTGATTATTATTCAAAACGAGCTCATGTTTACTAGAATTCAGTATCTGGGTTGTGCGTTTATTCTCCTGGCGCTTCTTTTTCTTCCCCTTGTCATTGTTATAAGAGAAGAATTCAGCATTAGGAAGAGAAAGTTGCAAGCTGTGGGTGCAACTTCTTGGCTTCCACTAGACCCATCTCCAGCTGAATTACTGTCGTCTAGACCACCAAGTTCGACCACGGCTGCCATAGCCGTAGCCATCCCAAGTTCTTGCTTTAAAAATGTGTTCAGACCACCGGAAAGAGGAGAGGACTACACCATTTTACAAGCAATCTTTAGCATAGATATGTTGATTCTGTTTGTTGCCACAATTTGTGGGGCTGGTGGAACTTTGACTGCAATGGACAACTTGAGTCAGATAGGCAGCTCCCTTGGCTATTCAACTCATAGCATTTCTACTTTCACTTCTCTCGTGAGTATATGGGGTTTTCTTGGTCGAGCATTTGCGGGTTATGCTTCTGAATTCTTATGGACAAAGTATAACTTCTCTCGCCCTTTGTTCCTCACTCTTGTGCTACTTTTCTCTTGTGTTGGTCATCTGCTCATTGCCTTTGGAGTCCCAACCTCCCTTTACTTTGCTTCAGTGATCATTGGATTTTGCTTTGGAGCACAATGGCCATTGATTTTCGCCATTGTTTCTGAATTATTTGGCTTGAAGTACTATGCAACTTTGTATAGCATAAGTGGAATTGCTAGCCCAGTTGGCTCATACATTTTCAATGTGAAAGTGGCTGGCAATTTATACGACCAAGAGGCTAAAAAGCAAATGGCAGCCATTGGTCTTAAAAGTGTAGCTGGTAGAGACTTAACCTGCAAGGGTGTCCAATGTTACAGATTAGCTTTTCTCATAATAACTGCTGCAACTGTGTTTGGCTGTGCCGTTTCATTCATTTTGGTGCTTAGAACTTGGGAATTCTATAAGGGTGATATCTATAAGAAGTTTAGAGAGGAAAAAAGGAAGCAGAATGATGAAGTTTGTATTCCCATCATAGACAAAAACTCTTCTGGCACTCTACAGCGCCAGTATATATAA 1956 43.0 MRFSLPSPFISLSSLSNFHHVNTTKSNCKCSLAKHLHQSTLPSLYKAAIQCAAIMRGARFSFSIRTGRRQMRNFALQVLLGRWFTVFASLLIMSVSGATYMFALYSADIKSSLNYDQTTLNLIGFFKDLGANVGVLSGLINEITPPWVVLFIGGVMNFFGYFMIWLSVTHRIHKPNVPAMCLYIFLGANSQTYANTGALIPSVKNFPENRGNVLGLLKGFVGLSGAILTQLYRAFYGDDSKDFILLIAWLPTAVSFLLLRIVRVVEVNGISKSNDLKNFYHMLYISLGLAGFLMVLIIIQNELMFTRIQYLGCAFILLALLFLPLVIVIREEFSIRKRKLQAVGATSWLPLDPSPAELLSSRPPSSTTAAIAVAIPSSCFKNVFRPPERGEDYTILQAIFSIDMLILFVATICGAGGTLTAMDNLSQIGSSLGYSTHSISTFTSLVSIWGFLGRAFAGYASEFLWTKYNFSRPLFLTLVLLFSCVGHLLIAFGVPTSLYFASVIIGFCFGAQWPLIFAIVSELFGLKYYATLYSISGIASPVGSYIFNVKVAGNLYDQEAKKQMAAIGLKSVAGRDLTCKGVQCYRLAFLIITAATVFGCAVSFILVLRTWEFYKGDIYKKFREEKRKQNDEVCIPIIDKNSSGTLQRQYI 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43350846 43352801 + Lag0012682.1 Lac1g2190 595761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2190 651 Pfam Nodulin-like 82 329 IPR010658 -
Lac1g2190 651 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 81 623 - GO:0016020(PANTHER)
Lac1g2190 651 CDD MFS_Mch1p_like 81 600 - -
Lac1g2190 651 SUPERFAMILY MFS general substrate transporter 81 611 IPR036259 -
Lac1g2190 651 Gene3D MFS general substrate transporter like domains 397 613 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2190 Lac-Chr1:43350846 Lac7g2474 Lac-Chr7:42245881 7.30E-169 dispersed
Lac1g2190 Lac-Chr1:43350846 Lac10g2988 Lac-Chr10:44461487 3.10E-212 wgd
Lac1g2190 Lac-Chr1:43350846 Lac8g2375 Lac-Chr8:41858954 3.50E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2190 - - - 0.0