Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2210 ATGTCTTCCACTCTCTGTTTTCCCTCCATCACTTTCCCCTCTACTTCCCTCCATAAGCGAATCCCTCTCAGGCGAACAACCCCACCTCCATATCTCTCCATTAAATCCTCCATTGACGAAAGGAATCCCTCTACGCCCGCCAAGCTCAACAACTCAACCAACAATGCGAAATCCGCTTCCTGGGTCAGCCCAGATTGGCTCACTTCTCTCACTCGCTACATTACCCTACGGCAGGGCGACGATTCGGGCATTCCCATAGCCAGTGCGAAGCTCGATGACGTTTCTGATCTTCTCGGCGGTGCTCTCTTCCTTCCACTCTTCAAGTGGATGAATGACTATGGACCCATTTACAGGCTCGCCGCTGGCCCTAGGAATTTCGTTGTGGTTAGTGACCCCGCCATTGCTAAGCATGTTCTCAGGAATTATGGGACTTATGCTAAGGGGCTTGTTTCTGAGGTCTCCGAGTTCTTGTTTGGGTCGGGTTTTGCGATTGCAGAAGGCCCGCTTTGGACGGTTCGCCGTAGGGCTGTGGTTCCGTCTCTTCACAAGAAGTACTTGTCAGTTATTGTTGATCGAGTATTCTGTAAATGTGCCATGAGATTGGTGGAGAAGCTGCAAAAGGATGCATTAAATAATAATTCAGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCTCTACTGACAGCCCTGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCAGAGGCTCGTTCTACTGATATTTTACCATATTGGAAGATTAAGGCTCTCTGTAAGATAATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACAGTGATCAGAAGAACTGTTGAAGAACTAATTGCCAAGTGCAAAGAGATTGTGGAAACTGAGGGTGAGCGTATTGATGAGGAGGAATATGTGAATGATGCTGATCCAAGCATCCTTCGTTTTCTGCTGGCCAGTAGACAAGAGGTCTCAAGTGTACAATTACGAGACGATCTATTGTCAATGTTAGTTGCTGGACATGAAACTACTGGTTCTGTTCTGACTTGGACACTGTATCTTTTAAGTAAGGACACCTCATCATTGATCAAGGCACAAAATGAAGTTGATAGAGTCTTACAAGGAAGGCCTCCTTCCTATGAAGATACTAAGGAACTTAAATTTTTGACACGTTGTATTCTCGAGTCGATGCGCCTTTACCCACATCCACCTGTTTTGATAAGAAGAGCTCAAGTTGCTGACATACTGCCTGGAAATTTCAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTATATAACATCCACCGTTCTTCCCAGGTTTGGGAACAAGCAGAAGAGTTTATACCAGAAAGATTTGACTTGGAAGGTCCTGTGCCTAATGAAAGCAACACAGATTTCAGATTTATTCCCTTCAGCGGAGGTCCCCGAAAGTGTGTTGGCGATCAATTTGCCCTGCTTGAAGCTATTGTTGCACTTGCCATATTTCTGCAGCATATGAACTTTGAGCTGGTTCCAGATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAGCGGTTTGTACATGAAACTCAGCCAAAGGCAGCTGACCCCAGAATTAGCTTCCCCCGCGTCTTTAAGGTAA 1674 44.74 MSSTLCFPSITFPSTSLHKRIPLRRTTPPPYLSIKSSIDERNPSTPAKLNNSTNNAKSASWVSPDWLTSLTRYITLRQGDDSGIPIASAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCAMRLVEKLQKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSTDSPVIDAVYTALKEAEARSTDILPYWKIKALCKIIPRQIKAEEAVTVIRRTVEELIAKCKEIVETEGERIDEEEYVNDADPSILRFLLASRQEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDTSSLIKAQNEVDRVLQGRPPSYEDTKELKFLTRCILESMRLYPHPPVLIRRAQVADILPGNFKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPDQTIGMTTGATIHTTSGLYMKLSQRQLTPELASPASLR 557
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 43514208 43519763 - Lag0012702.1 Lac1g2210 595781
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2210 557 Pfam Cytochrome P450 106 527 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 SUPERFAMILY Cytochrome P450 99 544 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 485 494 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac1g2210 557 Gene3D Cytochrome P450 85 552 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 CDD CYP97 104 538 - -
Lac1g2210 557 MobiDBLite consensus disorder prediction 30 59 - -
Lac1g2210 557 PANTHER CYTOCHROME P450 FAMILY 4 101 518 IPR050196 GO:0009507(PANTHER)|GO:0009974(PANTHER)|GO:0016117(PANTHER)
Lac1g2210 557 PRINTS E-class P450 group I signature 444 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 PRINTS E-class P450 group I signature 361 387 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 PRINTS E-class P450 group I signature 341 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 PRINTS E-class P450 group I signature 482 492 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 PRINTS E-class P450 group I signature 492 515 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 MobiDBLite consensus disorder prediction 22 59 - -
Lac1g2210 557 PRINTS P450 superfamily signature 492 503 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 PRINTS P450 superfamily signature 352 369 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2210 557 PRINTS P450 superfamily signature 483 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2210 Lac-Chr1:43514208 Lac5g1866 Lac-Chr5:36920308 7.70E-127 dispersed
Lac1g2210 Lac-Chr1:43514208 Lac11g0177 Lac-Chr11:1671895 1.70E-33 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2210 K09837 - csv:101204961 1023.46