Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac1g2253 | ATGTGTAACGAAATGAAACTGCACGAGATTCTACTTGTTTTTGTATTGCTTCTTTGGCTGGTCGCCTCTTTTATGATCCATGGCTCTAACCACCATGAAAGAAAGCCTTACATTGTGTATATGGGCGACCTGCCCGCCGGATCTCCGTCGTCCACGGTGGCGGATGACCACCACAACCTCCTTGTGGACGCCATTGGAGATGAAAAGACAGCTCGAGAGTCCAAAATCCACAGCTATGGAAAGAGCTTCAATGGGTTCGCCGCTAGACTTTTGCCTCACGAAGCCACCAAGCTCTCAAATTACGACGGTGTCGTTTCGGTGTTCCCGAGCAGAAAGCAGAGAGTTCTAACAACGAGATCGTGGGACTTTCTGGGACTGAATCATCGCTCCAAACGCAACCCTAAAATCGAGTCTAATATCATCGTCGCCGTTTTGGATACGGGAATTTGGATAAATAGTCCTAGTTTCAGCGATGAAGGTTACGGTCCACCTCCGCCTAAATGGAAGGGCAAATGCGTCACTGGCCCCAACTTCACCGCCTGCAACAACAAAGTGATCGGTGCGAATTACTTCGATCTGGACAACGGAAGCACATATCCAGAGACCAGCGTCGCCGACACGGAGGGCCATGGCTCTCACACGGCGTCCACTGTCGCAGGCTCGCCGGTGCCCGGGGCCAGCTTGTACGGCATCGCCAAAGGGACGGCTCGCGGCGGCGTCCCTTCCGCTCGAATTGCGGTCTACAAAGTGTGCTGGAGTATTTTCTGCAGCGAAATGGACGTACTTGCAGGCTTCGATGAGGCCATCGCCGACGGCGTCGATTTGATTTCCGTCTCCATAGGCTCGCCGCCGATTGATTTCTTCAGGGACAGTCAGGCCATCGGGGCTTTTCATGCCATGAAGAAGGGCATTTTGACGTCCTGCGCCGCCGGCAACGACGGCCCTGAATTGTCCACCGTCGAGAATGTCGCCCCCTGGATTATGACCGTCGCTGCAACCGCCATTGATAGACGATTCGTCACTGCTTTCAAACTCGGTAATGGCAAGAAATTTACTGGATTCTCCATCAACACTTTTTCGCCCAGGAAACAAATGTACTCTCTTACAAGTGGGGCCAAAGCGTCCTCTGGCACAACCAACCGAGGAAACGCAAGTGCTTGTGATGTTGAAGCTCTAAGCCAAAGCAAGGTGAAGGGAAGGATAGTGTATTGCTTGCAACCTTACACAGATCCCAACATCGAATCCTTAGGAGGCTCTGGAGTCCTTCAACTGCTTGATCAACAAATGGATTATTCCTCCATTTTGCTTCTTCCTGGGGCTGCCATCCCTCCAGTCTTTGGCAAATATATTGATCTTTACATCAACTCCACCAAGAATCCAAAAGCTGTCATTTATAAAAGTAAAACCATCAAAACTGCTGCTCCTTTTGTTGCATCTTTCTCATCCAGAGGGCCTCAGTCTATCAGCCGTAACATCCTCAAGCCTGATCTTGCTGCACCAGGGATAAACATCTTGGCTGCTTACACAAAGTTGGCCAGTTTGACAGGGTCAATGTCAGACAGTAGATATAGTTTATACAGTGTACTGTCAGGTACATCCATGGCTTGTCCTCATGCCACTGCCGCCGCTGCCTATGTTAAGTCATTCCACCCTGACTGGTCTCCAGCCGCGGTCAAGTCTGCTCTCATGACCACCGCGACTCCGATGAAGATCAAGTCCAAGGACGCTGAGTTTGGCTCTGGAGCAGGACAAATAAATCCAACCAAGGCGGTCCATCCCGGCCTTGTCTATGACATTTCGCTCAAGTCGTACATCTCTTTCCTCTGCAAAGAAGGCTACAACAGCACAACAATTGGCTTACTTGTTGGTAGCAAGAAGTATAACTGCTCTAAGATGAAACCTGCACAAGGCACCGATGGACTCAACTACCCTACAATGCACAAACAACTCTTAGATCCTAGTTCTTCCATTGCGGCAGTCTTTTATCGGACAGTGACTCATGTCGGGTACGGTACATCATTGTACAGGGCAAATATATCATCCCCAGATGGCCTCTCTGTCAAAGTTTTTCCAGACACTCTAAATTTTGTTAAGTTACATGAAAGTAAGACATTCAAAGTTGTGGTGAGGGGCAAACCTATGCCAGATGGAATACAGATTCTATCAGCTTTACTTGAATGGAACGACTCTAAACACATAGTTAGAAGCAATATCGTCATCTACAGGCAGTTATTCATGTAA | 2241 | 49.0 | MCNEMKLHEILLVFVLLLWLVASFMIHGSNHHERKPYIVYMGDLPAGSPSSTVADDHHNLLVDAIGDEKTARESKIHSYGKSFNGFAARLLPHEATKLSNYDGVVSVFPSRKQRVLTTRSWDFLGLNHRSKRNPKIESNIIVAVLDTGIWINSPSFSDEGYGPPPPKWKGKCVTGPNFTACNNKVIGANYFDLDNGSTYPETSVADTEGHGSHTASTVAGSPVPGASLYGIAKGTARGGVPSARIAVYKVCWSIFCSEMDVLAGFDEAIADGVDLISVSIGSPPIDFFRDSQAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATAIDRRFVTAFKLGNGKKFTGFSINTFSPRKQMYSLTSGAKASSGTTNRGNASACDVEALSQSKVKGRIVYCLQPYTDPNIESLGGSGVLQLLDQQMDYSSILLLPGAAIPPVFGKYIDLYINSTKNPKAVIYKSKTIKTAAPFVASFSSRGPQSISRNILKPDLAAPGINILAAYTKLASLTGSMSDSRYSLYSVLSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSKDAEFGSGAGQINPTKAVHPGLVYDISLKSYISFLCKEGYNSTTIGLLVGSKKYNCSKMKPAQGTDGLNYPTMHKQLLDPSSSIAAVFYRTVTHVGYGTSLYRANISSPDGLSVKVFPDTLNFVKLHESKTFKVVVRGKPMPDGIQILSALLEWNDSKHIVRSNIVIYRQLFM | 746 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 43976070 | 43981127 | - | Lag0012745.1 | Lac1g2253 | 595824 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac1g2253 | 746 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 37 | 738 | IPR045051 | - | |
Lac1g2253 | 746 | Pfam | Subtilase family | 138 | 581 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lac1g2253 | 746 | CDD | Peptidases_S8_3 | 117 | 567 | IPR034197 | - | |
Lac1g2253 | 746 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 142 | 152 | IPR023827 | - | |
Lac1g2253 | 746 | PRINTS | Subtilisin serine protease family (S8) signature | 137 | 156 | IPR015500 | - | |
Lac1g2253 | 746 | PRINTS | Subtilisin serine protease family (S8) signature | 530 | 546 | IPR015500 | - | |
Lac1g2253 | 746 | PRINTS | Subtilisin serine protease family (S8) signature | 206 | 219 | IPR015500 | - | |
Lac1g2253 | 746 | Pfam | Peptidase inhibitor I9 | 37 | 112 | IPR010259 | - | |
Lac1g2253 | 746 | CDD | PA_subtilisin_like | 343 | 464 | - | - | |
Lac1g2253 | 746 | SUPERFAMILY | Subtilisin-like | 13 | 634 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac1g2253 | 746 | Gene3D | Peptidase S8/S53 domain | 139 | 604 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lac1g2253 | 746 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 531 | 541 | IPR023828 | - | |
Lac1g2253 | 746 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 120 | 591 | - | - | |
Lac1g2253 | 746 | Gene3D | - | 336 | 470 | - | - | |
Lac1g2253 | 746 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 22 | 115 | IPR037045 | - | |
Lac1g2253 | 746 | Gene3D | - | 608 | 743 | - | - | |
Lac1g2253 | 746 | Pfam | Fibronectin type-III domain | 641 | 740 | IPR041469 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g1478 | Lac-Chr13:14820927 | Lac1g2253 | Lac-Chr1:43976070 | 7.20E-149 | dispersed | |
Lac13g1480 | Lac-Chr13:14863282 | Lac1g2253 | Lac-Chr1:43976070 | 1.10E-173 | dispersed | |
Lac1g2253 | Lac-Chr1:43976070 | Lac2g2679 | Lac-Chr2:41234342 | 1.60E-156 | dispersed | |
Lac9g2791 | Lac-Chr9:46030222 | Lac1g2253 | Lac-Chr1:43976070 | 3.30E-157 | transposed | |
Lac1g2253 | Lac-Chr1:43976070 | Lac10g2880 | Lac-Chr10:43329202 | 1.60E-40 | wgd |
Pathway information
