Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac1g2263 | ATGGCGGAGGAGCACAGATGCCAAGCACCTGAAGGTCACCGTCTCTGCGCCAATAATTGCGGCTTCTTCGGCAGTCCAGCCACCATGGATCTCTGCTCCAAATGTTACAGAGACATCCGTCTCAAAGAACAAGAACAAGCCTCCACCAAATCCACCATCGAAGCCGCTCTCTCAGCCTCATCTCCGTCTCCTCTCACCTCTTCCCCAATCGATCCTCCCCCCGTTTCCCCTGTTGTAGCCTTGTCCTCGCCGGACACAGATCTGACCATCCCGCCCCTTGCGGCGGCCGGATCTGAGGCGTTGAACCAGTCGAGCCCCAACCCTAACCCGAGCCCGAGCCCAAACCGGTGTTCGTCGTGCCGTAAGAAGGTGGGTTTGACCGGGTTCAGATGCAGATGCGGAACCACGTTCTGTGGGGCTCATAGGTACCCGGAGAAACACGGCTGCACCTTCGATTTCAAGTCGATCGGAAGAGAGGAGATCGCTCGAGCGAACCCCGTCGTCAAAGCCGACAAACTGGAGAGGATTTGA | 531 | 57.63 | MAEEHRCQAPEGHRLCANNCGFFGSPATMDLCSKCYRDIRLKEQEQASTKSTIEAALSASSPSPLTSSPIDPPPVSPVVALSSPDTDLTIPPLAAAGSEALNQSSPNPNPSPSPNRCSSCRKKVGLTGFRCRCGTTFCGAHRYPEKHGCTFDFKSIGREEIARANPVVKADKLERI | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 44067844 | 44068374 | + | Lag0012755.1 | Lac1g2263 | 595834 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac1g2263 | 176 | ProSiteProfiles | Zinc finger AN1-type profile. | 111 | 157 | IPR000058 | GO:0008270(InterPro) | |
Lac1g2263 | 176 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 11 | 176 | IPR050652 | - | |
Lac1g2263 | 176 | FunFam | Zinc finger AN1-type containing 6 | 94 | 172 | - | - | |
Lac1g2263 | 176 | MobiDBLite | consensus disorder prediction | 48 | 65 | - | - | |
Lac1g2263 | 176 | SMART | AN1_Zf_4 | 117 | 154 | IPR000058 | GO:0008270(InterPro) | |
Lac1g2263 | 176 | Gene3D | - | 1 | 63 | - | - | |
Lac1g2263 | 176 | Gene3D | - | 94 | 172 | IPR035896 | - | |
Lac1g2263 | 176 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 15 | 60 | - | - | |
Lac1g2263 | 176 | MobiDBLite | consensus disorder prediction | 46 | 117 | - | - | |
Lac1g2263 | 176 | Pfam | AN1-like Zinc finger | 117 | 153 | IPR000058 | GO:0008270(InterPro) | |
Lac1g2263 | 176 | SUPERFAMILY | AN1-like Zinc finger | 102 | 171 | IPR035896 | - | |
Lac1g2263 | 176 | SMART | A20_3 | 13 | 37 | IPR002653 | GO:0003677(InterPro)|GO:0008270(InterPro) | |
Lac1g2263 | 176 | ProSiteProfiles | Zinc finger A20-type profile. | 10 | 44 | IPR002653 | GO:0003677(InterPro)|GO:0008270(InterPro) | |
Lac1g2263 | 176 | Pfam | A20-like zinc finger | 14 | 37 | IPR002653 | GO:0003677(InterPro)|GO:0008270(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g2263 | Lac-Chr1:44067844 | Lac9g2709 | Lac-Chr9:45353018 | 4.10E-42 | dispersed | |
Lac1g2263 | Lac-Chr1:44067844 | Lac11g2189 | Lac-Chr11:38017721 | 1.00E-37 | transposed |
Pathway information
