Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2316 ATGGGGGTTCCACAGACGATGGAAATCCTGAGCGAGAGAGCCACACTTGTCAGAGAGTCGCTGCAGAAGAGCCAGAATGTCACCGAGAGCATGGTCTCCATTCTTGGCTCCTTCGACTCCCGTCTCTCCGCCCTCGAAACCGCAATGCGGCCTACTCAGATAAGAACTCATTCAATTCGGAGGGCGCATGAGAATATTGACAAGACATTGAAGACTGCAGAAAGTATGCTAGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGGCCACATGAGGACTTAGAAATGTACTTGGAAGCAATCGATCAACTACGAAGTACAAATCGCTTCTTTACTGGGAACAAAAATTTCAAAAGTAACGATACTATTCTTATCCATACAAGCAACTTGCTTGTTAAAGCCATTTCAAAACTGGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAGCCAGTGGAACCTGATCGTCTTTTCGATTGCCTCCCCAACTCTTTGCGTCCATCATCAGCCTCTGCGCAGCAAGGTGATAGTGGTAGCAAAACTAATTCTGACCATCACAACAAAAGCTTAGAAGCTGCCATCTTCATTCCCCCAACTCTTATTCCTCCCAGGGTTCTTCCGTTGTTGCATGATTTGGCCCAACAAATGATTCTGGCTGGCCATCAGCAGCAACTGTTTAGAATATACAGGGATACTCGCGCTTCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTGAGCAAGGATGACGTCCAGAAAATGCAGTGGGAGGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCTGTCAAACTGCTGTTTGCTGGGGAAAGGAAAATCTGTGATCAAATATTTGATGGTGCAGACTCTCTCCAGGATCAATGCTTCGCAGATGTGACTGCAAACAGTGTGTCAGTGCTACTAAGTTTTGGAGAGGCAATTGCCAAAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTTTAGACATGTATGAAATAATGCGAGAACTGCAATCTGAGATTGAAACACTTTTTGGAAGTAAAACATGCATTGAAATGCGGGATTCTGCATTGAGCTTAACAAGACGTCTTGCTGAGACAGCTCAAGAGACTTTTGTTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACTGCTGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAACTACGTCAAGTTTTTATTTGACTACCAATCTACTTTGAAGCAACTATTTCTAGACTTTGAGGCTGGTGATCCAGATGCTCAGTTAGCAATAGTAACTACAAGAATTATGCAGGCCCTTCAGACTAATCTTGATGGAAAATCTAAGCAATATAGGGATCCTGCATTAACTCAGTTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGAAGATCAGAGGCAAAAGATTTGTTGGGTGATGACTGGGTGCAGATACATCGAAGAATTGTGCAACAGCATGCAAATCAATATAAGCGGATTTCTTGGGCAAAGATTTTGCAGTGCCTCACTGTTCAGGCCTCAGGTAGTGGTGGTGCTTCGGGAGATGCTAGCAGTGGACTCTCAAGAGCTATGGTGAAAGATAGGTTTAAGACTTTTAACATCCAATTTGAAGAGCTTCATCAACGGCAATCTCAATGGACAGTTCCTGACAGTGAGTTGCGGGAGTCATTGAGGTTGGCAGTTGCTGAAGTTTTATTGCCTGCCTACCGATCCTTCATCAAGCGTTCCGGGCATGTTCTCATTACTGAACTTTAA 1824 43.2 MGVPQTMEILSERATLVRESLQKSQNVTESMVSILGSFDSRLSALETAMRPTQIRTHSIRRAHENIDKTLKTAESMLAQFDLTRKAEAKILRGPHEDLEMYLEAIDQLRSTNRFFTGNKNFKSNDTILIHTSNLLVKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSASAQQGDSGSKTNSDHHNKSLEAAIFIPPTLIPPRVLPLLHDLAQQMILAGHQQQLFRIYRDTRASVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGERKICDQIFDGADSLQDQCFADVTANSVSVLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQSEIETLFGSKTCIEMRDSALSLTRRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFLDFEAGDPDAQLAIVTTRIMQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGSGGASGDASSGLSRAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRSGHVLITEL 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 44527486 44535674 - Lag0012808.1 Lac1g2316 595887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2316 607 Pfam Exo70 exocyst complex subunit C-terminal 273 600 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Lac1g2316 607 Gene3D Exocyst complex component Exo70 75 605 - -
Lac1g2316 607 SUPERFAMILY Cullin repeat-like 76 600 IPR016159 -
Lac1g2316 607 MobiDBLite consensus disorder prediction 168 189 - -
Lac1g2316 607 Pfam Exocyst complex component Exo70 N-terminal 69 151 - -
Lac1g2316 607 PANTHER EXOCYST COMPLEX PROTEIN EXO70 12 601 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Lac1g2316 607 MobiDBLite consensus disorder prediction 169 185 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0596 Lac-Chr13:4412545 Lac1g2316 Lac-Chr1:44527486 1.60E-256 dispersed
Lac1g2316 Lac-Chr1:44527486 Lac7g2884 Lac-Chr7:47942878 4.10E-89 dispersed
Lac1g2316 Lac-Chr1:44527486 Lac3g0086 Lac-Chr3:577593 8.20E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2316 K07195 - csv:105436018 1102.81