Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2375 ATGGCGACCATGAATTCCAGCGTTTTGGCCTGCAACTACGCCATTTCAGGCGCTGGATCGGCCGAGCTTAACTCCAAACTCAGCGCTGTGCCTTCTGTCGCATCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCCATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGAAGGAAGGAGAACTGCGCTTCTTTTCCTTGGTGCTTCCCTCTTTACTGCGGCTGCGGCTGCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAGAGATTGGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTGAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAGCAAAAGAAAGTTCCATTTATCTCAGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA 516 48.06 MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFTAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 45079800 45080749 + Lag0012867.1 Lac1g2375 595946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2375 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER)
Lac1g2375 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 43 171 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)
Lac1g2375 171 FunFam Photosystem I reaction center subunit N 87 171 - -
Lac1g2375 171 Gene3D - 87 171 IPR044907 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2375 K02701 - csv:101204396 293.508