Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2414 ATGAGTCTTCTTTCCAAAGCAGCGTTTGCTTCTGGCATGAACAGCTTTGTGTTTGTCTTCTACAGGCAAGCTGCTGGGGCTGTTTTTTTCCTTCCTCTGATGATGTTTTTAAAAAGAAAAGAGAGCCGACCACTTTCTCTTAAGGATTTCTTGAAGATTTTTGCGATTTCGTTAATTGGGATGACAATTGGATTCAATGCCTATGGTGTGGCTGTTGATTACACATCTGCAAATCTGGGTGCTGCTGCATTCAATTGCCTCCCAGTCACAACATTTCTCTTTGCAGTTTTGTTAAGGATGGAGAAAGTAAACTTGAGAACAGTGGCTGGAATGGCAAAGGCTGTTGGCATAATAGTTTGCATTGGGGGAGTGGTGACACTTGCATTCTACAAAGGTCCATATTTGAAGCCACTCATCAATCATCACCTTTTCCAATTTCACAAAAGCCAACCCCACAAACCTCATCACTCTTCTTCAACAACATGGATCATTGGCTGTTTCCTTCTCTTTGTCTCTAGCATCTCCTGGGGTTTGTGGTTTGCTCTTCAGGCTCATTTTCTCAAGACTTATCCATCTCCACTGGAGTTCGTTAGTTACCAAACAATTCTAAGCACAGCCCAATCTTTTGTGGTCGCCATTGCCATGGAAAGAAACCCTTCTCAGTGGAAGTTGGGTTGGAACATTAGGCTTGTTGCTGTTCTTTACTGCGGAATCCTTGTGACTGTTGTTTCGAATTTCTTGCAATGTTGGGTTATCAAAGAAAAGGGTCCAGTTTTTCAAGCCATGACGACGCCATTGAATGTCATTGCCACTATCATTGGCTCTGAATTGCTGTTGGGTGAGGGTATCCATTTGGGAAGTCTGATCGGTGCAATGTTGTTGGTGGTGAGCCTTTACAGTGTATTATGGGGCAAAAGCAAAGAGCTCAACATGATTGATAGAGATAGTAATCAACCAGCTATTCTACCAGTTGAAGCAAAAGACTTGGTAGAAATGAGATCACCTCCTCAGCCATAG 1017 42.77 MSLLSKAAFASGMNSFVFVFYRQAAGAVFFLPLMMFLKRKESRPLSLKDFLKIFAISLIGMTIGFNAYGVAVDYTSANLGAAAFNCLPVTTFLFAVLLRMEKVNLRTVAGMAKAVGIIVCIGGVVTLAFYKGPYLKPLINHHLFQFHKSQPHKPHHSSSTTWIIGCFLLFVSSISWGLWFALQAHFLKTYPSPLEFVSYQTILSTAQSFVVAIAMERNPSQWKLGWNIRLVAVLYCGILVTVVSNFLQCWVIKEKGPVFQAMTTPLNVIATIIGSELLLGEGIHLGSLIGAMLLVVSLYSVLWGKSKELNMIDRDSNQPAILPVEAKDLVEMRSPPQP 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 45537259 45539804 - Lag0012906.1 Lac1g2414 595985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2414 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 128 - -
Lac1g2414 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 306 - -
Lac1g2414 338 Pfam EamA-like transporter family 10 121 IPR000620 GO:0016020(InterPro)
Lac1g2414 338 Pfam EamA-like transporter family 164 302 IPR000620 GO:0016020(InterPro)
Lac1g2414 338 PANTHER WAT1-RELATED PROTEIN 1 313 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2414 Lac-Chr1:45537259 Lac9g0310 Lac-Chr9:4958882 3.50E-90 dispersed
Lac1g2411 Lac-Chr1:45516088 Lac1g2414 Lac-Chr1:45537259 1.20E-09 proximal
Lac1g2414 Lac-Chr1:45537259 Lac1g2415 Lac-Chr1:45557049 8.00E-119 tandem
Lac3g1124 Lac-Chr3:9316263 Lac1g2414 Lac-Chr1:45537259 1.00E-77 transposed
Lac5g0292 Lac-Chr5:2941665 Lac1g2414 Lac-Chr1:45537259 1.20E-20 transposed
Lac5g0293 Lac-Chr5:2945137 Lac1g2414 Lac-Chr1:45537259 4.30E-56 transposed
Lac1g2062 Lac-Chr1:42153373 Lac1g2414 Lac-Chr1:45537259 1.10E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2414 - - - 0.0