Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac1g2414 | ATGAGTCTTCTTTCCAAAGCAGCGTTTGCTTCTGGCATGAACAGCTTTGTGTTTGTCTTCTACAGGCAAGCTGCTGGGGCTGTTTTTTTCCTTCCTCTGATGATGTTTTTAAAAAGAAAAGAGAGCCGACCACTTTCTCTTAAGGATTTCTTGAAGATTTTTGCGATTTCGTTAATTGGGATGACAATTGGATTCAATGCCTATGGTGTGGCTGTTGATTACACATCTGCAAATCTGGGTGCTGCTGCATTCAATTGCCTCCCAGTCACAACATTTCTCTTTGCAGTTTTGTTAAGGATGGAGAAAGTAAACTTGAGAACAGTGGCTGGAATGGCAAAGGCTGTTGGCATAATAGTTTGCATTGGGGGAGTGGTGACACTTGCATTCTACAAAGGTCCATATTTGAAGCCACTCATCAATCATCACCTTTTCCAATTTCACAAAAGCCAACCCCACAAACCTCATCACTCTTCTTCAACAACATGGATCATTGGCTGTTTCCTTCTCTTTGTCTCTAGCATCTCCTGGGGTTTGTGGTTTGCTCTTCAGGCTCATTTTCTCAAGACTTATCCATCTCCACTGGAGTTCGTTAGTTACCAAACAATTCTAAGCACAGCCCAATCTTTTGTGGTCGCCATTGCCATGGAAAGAAACCCTTCTCAGTGGAAGTTGGGTTGGAACATTAGGCTTGTTGCTGTTCTTTACTGCGGAATCCTTGTGACTGTTGTTTCGAATTTCTTGCAATGTTGGGTTATCAAAGAAAAGGGTCCAGTTTTTCAAGCCATGACGACGCCATTGAATGTCATTGCCACTATCATTGGCTCTGAATTGCTGTTGGGTGAGGGTATCCATTTGGGAAGTCTGATCGGTGCAATGTTGTTGGTGGTGAGCCTTTACAGTGTATTATGGGGCAAAAGCAAAGAGCTCAACATGATTGATAGAGATAGTAATCAACCAGCTATTCTACCAGTTGAAGCAAAAGACTTGGTAGAAATGAGATCACCTCCTCAGCCATAG | 1017 | 42.77 | MSLLSKAAFASGMNSFVFVFYRQAAGAVFFLPLMMFLKRKESRPLSLKDFLKIFAISLIGMTIGFNAYGVAVDYTSANLGAAAFNCLPVTTFLFAVLLRMEKVNLRTVAGMAKAVGIIVCIGGVVTLAFYKGPYLKPLINHHLFQFHKSQPHKPHHSSSTTWIIGCFLLFVSSISWGLWFALQAHFLKTYPSPLEFVSYQTILSTAQSFVVAIAMERNPSQWKLGWNIRLVAVLYCGILVTVVSNFLQCWVIKEKGPVFQAMTTPLNVIATIIGSELLLGEGIHLGSLIGAMLLVVSLYSVLWGKSKELNMIDRDSNQPAILPVEAKDLVEMRSPPQP | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 45537259 | 45539804 | - | Lag0012906.1 | Lac1g2414 | 595985 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac1g2414 | 338 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 21 | 128 | - | - | |
Lac1g2414 | 338 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 222 | 306 | - | - | |
Lac1g2414 | 338 | Pfam | EamA-like transporter family | 10 | 121 | IPR000620 | GO:0016020(InterPro) | |
Lac1g2414 | 338 | Pfam | EamA-like transporter family | 164 | 302 | IPR000620 | GO:0016020(InterPro) | |
Lac1g2414 | 338 | PANTHER | WAT1-RELATED PROTEIN | 1 | 313 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g2414 | Lac-Chr1:45537259 | Lac9g0310 | Lac-Chr9:4958882 | 3.50E-90 | dispersed | |
Lac1g2411 | Lac-Chr1:45516088 | Lac1g2414 | Lac-Chr1:45537259 | 1.20E-09 | proximal | |
Lac1g2414 | Lac-Chr1:45537259 | Lac1g2415 | Lac-Chr1:45557049 | 8.00E-119 | tandem | |
Lac3g1124 | Lac-Chr3:9316263 | Lac1g2414 | Lac-Chr1:45537259 | 1.00E-77 | transposed | |
Lac5g0292 | Lac-Chr5:2941665 | Lac1g2414 | Lac-Chr1:45537259 | 1.20E-20 | transposed | |
Lac5g0293 | Lac-Chr5:2945137 | Lac1g2414 | Lac-Chr1:45537259 | 4.30E-56 | transposed | |
Lac1g2062 | Lac-Chr1:42153373 | Lac1g2414 | Lac-Chr1:45537259 | 1.10E-49 | wgd |
Pathway information
