Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac1g2453 ATGGTCAACGAGCAAGAAGAACTGGACTGCAACGACAAGTTCTTGAGAGACACGGTCTTAAACTTCATGATCGCAGGCCGAGACGCTTTCAGCGTAACTCTCTCTTGGCTCTTCTACACTCTCTCCAAGAACCCCATCATATTAACAAAGATTCGAGAAGAGCTCGAAGGCATAATAAACCCACAAAAACAACAACAAAGAACAATATTCTCCATTGAAGAGCTCAACAACCTCGTTTACTTGCATGGAGCCTTATGCGAAACGCTTCGTCTCTATCCTCCGATTGCGTTCGAGCACAAATCTCCGGCAGAGGCCGACACCCTTCCGAGCGGCCACCACGTGAAGCCACACACGATGATCCTCTTCTCGTTGTACGCACTGGGAAGAATGAGGTCTGTTTGGGGAGAGGATTGCGAAGAATTCAAACCAGAGAGATGGATTTCGGAGAAGGGGACGATCAAACGAGAGCCTTCCTATAAGTTCTTTAGTTTCAATGCAGGGCCGAGGACTTGTTTGGGAAAAGGAGTGGCTTTTTCCCAGTTGAAGATTGTTTCAGCTGCCATTATCCATAACTACGACATTCAAGCTGTTGAAGAAAACGATGTCGTTGTTGCTCCAGCTTCTTCTGTGATTCTTCACATGAACAGTGGGTTCAATGTTAGGGTTTCTAAGAGATGGACATGA 684 46.35 MVNEQEELDCNDKFLRDTVLNFMIAGRDAFSVTLSWLFYTLSKNPIILTKIREELEGIINPQKQQQRTIFSIEELNNLVYLHGALCETLRLYPPIAFEHKSPAEADTLPSGHHVKPHTMILFSLYALGRMRSVWGEDCEEFKPERWISEKGTIKREPSYKFFSFNAGPRTCLGKGVAFSQLKIVSAAIIHNYDIQAVEENDVVVAPASSVILHMNSGFNVRVSKRWT 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 45991030 45991713 + Lag0012945.1 Lac1g2453 596024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac1g2453 227 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 164 173 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac1g2453 227 PRINTS E-class P450 group I signature 171 194 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 PRINTS E-class P450 group I signature 34 60 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 PRINTS E-class P450 group I signature 161 171 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 PRINTS E-class P450 group I signature 14 31 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 PRINTS P450 superfamily signature 83 94 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 PRINTS P450 superfamily signature 162 171 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 PRINTS P450 superfamily signature 171 182 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 PRINTS P450 superfamily signature 25 42 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 Pfam Cytochrome P450 8 210 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 Gene3D Cytochrome P450 1 226 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac1g2453 227 PANTHER CYTOCHROME P450 9 218 - -
Lac1g2453 227 SUPERFAMILY Cytochrome P450 7 225 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2453 Lac-Chr1:45991030 Lac1g2455 Lac-Chr1:46005180 2.10E-115 dispersed
Lac1g2453 Lac-Chr1:45991030 Lac1g2454 Lac-Chr1:46001011 1.00E-93 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac1g2453 - - - 0.0